Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00774 ATGTCTCCCTCCAACACGCCGAAATCGGagaagaagaaaacgaaaaccgaaagcaaaacgaagaagaaggatagagccgtcgagaaagaggaaaacgacaagaagaagaataagaagCTCAAGCTCAGCAATGGCAATTCGGAACAACACGGCGAGAAGGGATTAAAATGCAACGGAGAAGAGGCGAAGACGAACGTGTTTCCGATGAATCGTATCAGGACCATGATTAAGGGCGAGGATCCCGATATGCGCGTTTCGCAGGAAGCTTTGTTGGCCATCAACAATGCTGTGGAGAAGTTCCTTGAGCAATTCACGCAGGACGCTTATGCTTCTTGTGTTCAGGACCGCAAGAAATCGCTGCATTACAAGCACCTAGCGCATGTTGTTAGTAAGCAGAGGAGATATGACTTTCTTTCCGattttgttcctgagaaagtaaaagctgaggatgcattaagagaGAGAGAAGTTCATCAGACAATGGAGGATGTTAGAAAATCTAAAGCAATCTAG 513 0.3528 MSPSNTPKSEKKKTKTESKTKKKDRAVEKEENDKKKNKKLKLSNGNSEQHGEKGLKCNGEEAKTNVFPMNRIRTMIKGEDPDMRVSQEALLAINNAVEKFLEQFTQDAYASCVQDRKKSLHYKHLAHVVSKQRRYDFLSDFVPEKVKAEDALREREVHQTMEDVRKSKAI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00774 170 MobiDBLite consensus disorder prediction 20 46 - -
Cca04g00774 170 MobiDBLite consensus disorder prediction 1 62 - -
Cca04g00774 170 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 159 - -
Cca04g00774 170 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR AND ARCHAEAL HISTONE FAMILY PROTEIN, EXPRESSED 7 159 - -
Cca04g00774 170 SUPERFAMILY Histone-fold 51 138 IPR009072 GO:0046982
Cca04g00774 170 Gene3D Histone, subunit A 4 144 IPR009072 GO:0046982
Cca04g00774 170 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 67 129 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00774 20 125 CCAAT-HAP5 Transcription Factor Family AT1G07980 37.736 1.38e-16 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Cca04g00774 CBFD_NFYB_HMF 7.3e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00774 - K03506 gmx:100793738 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00774 04 7699293 7702728 Cca04g00774 04 7699293 7702728 ECH