Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00754 ATGGCAGGAGGAAGTGGAGGAAGGAACTTGGAGGAAACGCCTACATGGGCAGTCTCAGCTGTTTGCTTTGTTTTGATCACAATATCTATAATCATCGAGCATATCATCCATCTCATAGGAAAGTGGTTGAAGAAGAAGCACAAAAGAGCTATGTACGAGTCACTTGAAAAGATAAAATCAGAGCTTATGTTATTGGGGTTCTTATCGTTGCTTCTAACGGTGGGACAAGGTCCAATATCAAGGATATGTATATCGGAAAAAGTTGCAGGGACATGGCACCCTTGCAGCAAGGACGACGAAAGCCATGACTCAGATAGTGAAGATTCGCAACACGGAACCAATGGTCGTAGGTTGTTAGCGGCGTTCTATGCTTCGGACACGCGGCGTCTTTTGGCCGGAGGAGGAAGCCACAAGTGTGCCCAGGGTAAAGTCCCGTTTGTGTCATCGGATGGCATTCATCAACTCCATATATTTATCTTCGTGCTGGCTGTTTTCCATGTTCTTTACTGCGTCATCACTATGGCTCTGGGTAGAGCAAAGATGAAAAGGTGGAAACGATGGGAAGAGGAAACCAAGACACCTCAGTACCAATTTTCACACGATCCTGAGAGATTCAGATTTGCGAGGGACACATCGTTTGGAAGAAGACACTTGAGCTTCTGGACCAAAAATCCTGTCCTCATGTGGCTTGTTTGTTTCTTTAGGCAGTTTGTGCGGTCAGTTCCTAAAGTGGATTACTTAACCTTGAGACATGGATTTATAATGGCACATTTGGCTCCTCAAAGTCACTCcaaatttgattttaggaaatacataaaacgatcactggacgaggatttcaaagttgtcgttggaatcagTCCTCCATTCTGGTTCTTCGCAGTGCTGTTTCTCCTCTTAAACACTCATGGGTGGTACTCTTATCTGTGGCTGCCATTTATCCCTTTGATTATCATCTTGTTGGTTGGAACCAAGTTGCAAGTGATCATAACCGAGATGGGCCTAAGAATTCAACAAAGGGGAGAGGTACTGAAGGGCGTGCCTTTGGTGCAACCAGGGGATCACTTGTTCTGGTTTAACAGACCAGGCCTTATTCTTTACCTCATCAATTTTGTGCTATTTCAGAATGCTTTCCAGCTGGCTTTTTTCTCATGGTCTGCGCTTCAATTCGGGATTCGATCATGTTTCCATTCGCATACGGAGGATGTGGTGATCAGAATCACAATGGGGGTCCTGATTCAAATCCTGTGCAGCTACGTCACTCTTCCTCTCTACGCTCTAGTAACACAGATGGGTTCGACAATGAAGGCAACAATTTTCAACGAAAGAGTGGCGGTTGCGCTGCGGAACTGGCACCAAACCGCGAAGAAGCACATAAGACAGAACCGCGTGGGACCGTTGTCGTTGTCGGGGACACCAACGTCAAGCAGACCCACAACGCCGAGTCACCACATGTCCCCAGTGCACCTCCTACGATACTACCGTTCCGAAGCGGATAGCTTCCCTGCTTCTCCTCGAAGGTCTAACTTGGATTCCCAACCTTGGGATAATAGTAACATCAACGTTGATTCCCCTTCTCCTTCTTACTCCCACCACCAATTGGAAATGGCTCCACAAACCAATGACCCCACCGTTGACACAACGCACCATGAGATTGTTGTTGCACGTCATAGCAAGGAGTTTTCCTTTGATAAAAGACCTACTACTAATAATACGTAA 1719 0.4468 MAGGSGGRNLEETPTWAVSAVCFVLITISIIIEHIIHLIGKWLKKKHKRAMYESLEKIKSELMLLGFLSLLLTVGQGPISRICISEKVAGTWHPCSKDDESHDSDSEDSQHGTNGRRLLAAFYASDTRRLLAGGGSHKCAQGKVPFVSSDGIHQLHIFIFVLAVFHVLYCVITMALGRAKMKRWKRWEEETKTPQYQFSHDPERFRFARDTSFGRRHLSFWTKNPVLMWLVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHSKFDFRKYIKRSLDEDFKVVVGISPPFWFFAVLFLLLNTHGWYSYLWLPFIPLIIILLVGTKLQVIITEMGLRIQQRGEVLKGVPLVQPGDHLFWFNRPGLILYLINFVLFQNAFQLAFFSWSALQFGIRSCFHSHTEDVVIRITMGVLIQILCSYVTLPLYALVTQMGSTMKATIFNERVAVALRNWHQTAKKHIRQNRVGPLSLSGTPTSSRPTTPSHHMSPVHLLRYYRSEADSFPASPRRSNLDSQPWDNSNINVDSPSPSYSHHQLEMAPQTNDPTVDTTHHEIVVARHSKEFSFDKRPTTNNT 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00754 572 Pfam Mlo family 8 494 IPR004326 GO:0006952|GO:0016021
Cca04g00754 572 MobiDBLite consensus disorder prediction 502 545 - -
Cca04g00754 572 PANTHER MLO-LIKE PROTEIN 1 1 533 IPR004326 GO:0006952|GO:0016021
Cca04g00754 572 MobiDBLite consensus disorder prediction 465 483 - -
Cca04g00754 572 MobiDBLite consensus disorder prediction 462 486 - -
Cca04g00754 572 PANTHER MLO-LIKE PROTEIN 1 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00754 Cca-Chr4 7569844 7576270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00754 8 565 MLO family AT2G39200 58.048 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00754 K08472 - gmx:100794779 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00754 04 7569844 7576270 Cca04g00754 04 7569844 7576270 ECH
Cca10g00498 10 5206544 5227022 Cca04g00754 04 7569844 7576270 ECH
Cca03g02357 03 44540742 44547429 Cca04g00754 04 7569844 7576270 ECH
Cca10g00498 10 5206544 5227022 Cca04g00754 04 7569844 7576270 PCT