Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g00739 | ATGGAGAGTAGTGACACTTGCTCTGCCCCACTTTCTCACTCTCCCACATCCTCTTCTTCCTCACCCCCCACAGTTGTGATGAGCCCTTGTGCTGCATGCAAGATTTTGAGGAGAAGATGTGCTGACAAATGTGTTTTGGCACCTTATTTCCCTCCCACTGAACCTTCCAAGTTCACCATTGCACACCGTGTATTTGGTGCCAGCAACATCATCAAGTTCCTACAGGAACTTCCAGAGTCGCAGAGAGCTGATGCAGTGACCAGCATGGTTTATGAGGCTAGTGCAAGAATAAGGGACCCTGTTTATGGCTGTGCAGGAGCAATTTGCCAGCTCCAAAAGCAGGTGAATGAACTTCAAGCACAATTAGCCAAGGCACAAGCTGAGCTTGTAAACATGCAATTTCAGCAAGCCAATCTTGTGGCTCTAATTTGCATGGAAATGGCACAGAGCCCACAACAGGAATCACCACAACAATCAGTGGATAATATTGTCATTTCAACTCCTCCCCACAGTGGTGGCTATCAAAGTGGCATGAACTTCTTAATTGAGGAGAACACTAGCCTAAACTCACTATGGGAGCCTCTTTGGACTTGA | 594 | 0.4697 | MESSDTCSAPLSHSPTSSSSSPPTVVMSPCAACKILRRRCADKCVLAPYFPPTEPSKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAELVNMQFQQANLVALICMEMAQSPQQESPQQSVDNIVISTPPHSGGYQSGMNFLIEENTSLNSLWEPLWT | 197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g00739 | 197 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 1 | 17 | 194 | - | - | |
Cca04g00739 | 197 | Coils | Coil | 108 | 135 | - | - | |
Cca04g00739 | 197 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cca04g00739 | 197 | ProSiteProfiles | LOB domain profile. | 28 | 129 | IPR004883 | - | |
Cca04g00739 | 197 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 17 | 194 | - | - | |
Cca04g00739 | 197 | Pfam | Lateral organ boundaries (LOB) domain | 29 | 126 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g00739 | Cca-Chr4 | 7381720 | 7384153 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g00739 | 25 | 197 | AS2 family | AT1G07900 | 65.909 | 7.65e-78 | 229 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Cca04g00739 | LOB | 2e-41 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g00739 | - | - | ccaj:109798760 | 353.984 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca04g00739 | 04 | 7381720 | 7384153 | Cca04g00739 | 04 | 7381720 | 7384153 | ECH | |
Cca10g00491 | 10 | 5113691 | 5115608 | Cca04g00739 | 04 | 7381720 | 7384153 | ECH | |
Cca10g00491 | 10 | 5113691 | 5115608 | Cca04g00739 | 04 | 7381720 | 7384153 | PCT |