Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00700 ATGCCAAGAAAAGGAATGAGAAGCATTTTCTTCAAACCATCGCCTCCTCCACCCGCCACGTCATCACTACCACCTCCCTCCCCTCTCCGCACATTCTCGGACTCTATAATGGAAGAAAACATTCAAACCGCAGAGTCTCTCATAACCAAATGGGACGATTCCAACGCTAATTACCGAACTAAATTCCCAATCCCTCTTTTCAGCGGCCCGCGCCACGAAGCCAAACAGTACCTAAACGCGGTGAAGGGACTACAGGCCGCTATGCAACACCTCGTCGCACAGGATTCCTCCTCCACCACCCTCGTTCGCGCTCAGTTTCTGATGCAACTCGCGATGAAGACGCTGCAGAAAGAGTTCTACCAGATTCTATCCTCCAACAGAGACCACCTCGATCCCGAAACCGTCTCCACGCGCTCCTCCGTCGACCGCCGGAGCAGCGTCTCCGACTATGTCTCCGATTACGACGACGAAATCTCAATCTCGATCTCCGAGGACGAGTATCGTGTCTCTGAGACGGAGAGAGTTTCCATGCTCGCTATGGACGATTTGAAGGCAATTGCGGAGTGCATGATTTCCTCTGGCTACGGAAAAGAGTGCGTCAAGGTTTACATCATCATGAGAAAATCGATCGTCGATGAAGCACTGTACCATCTCGGAATGGAACGGTTGAGCTTCTCTCAGGTTCAGAAGCTGGATTGGGAGGTTCTCGAGTTGAAGATCAAGAGCTGGCTAAAGGCCGCGAAAGTCGCCGTCGGAACTCTCTTCCACGGCGAGTGGATCCTCTGCGACCATGTTTTCGGCGCGGACTCGGGAAAGAGAGTCGCGGAATCGTGCTTCGCGGAAATCGCCAAAGACGGCGCCGCGTCGCTGTTTGGATTCCCGGAGATGGTGGCGAAGTGCAAGAAAACGCCGGAGAAAATGTTCAGGACTCTGGATTTGTACGAAGCGATCTCCGACCACTGGCCGCAAATCGAATCGATATTCTCCTTCGAATCCACGTCGAACATTCGGTTACAGGCCGTTACGTCGATGGTGAAACTCGGCGAGGCCGTTAGGACGATGCTAACGGACTTCGAAACCGCGATTCAGAAGGACGCCTCCAAGAAACCGGCCCCTGGCGGTGGAATCCACCCTCTCACGCGCTACGTGATGAACTACCTCACGTTCCTCGCCGATTACAGCGGCGTGCTGGTCGATATAATCGCCGATTCGCCGCAGTCGCCGTTGCCGGAGTCATACTTCCGCAGCCCGATGCGCGAGGAAAACGCGGCGGCGTCGGAGTTATCGGAGCGAATCGCGTGGATTATTCTCGTGGTGCTGTGCAAGCTCGACGGCAAAGCGGAACTCTACAAGGACGTGGCGCTTTCGTACCTGTTCCTCGCGAATAACACGCAATACGTCGTCGTAAAGGTGCGCAAATCGAACCTAGGGTTCCTTCTCGGCGAGGAGTGGTTGGCGAAGCAAGAAGCGAAGGCTAGAGAGTACGCGTCCAAGTACGAGCGCGTCGGGTGGGGCGCGGTGCTCGCCTCGCTGCCGGAGAATCCCGCGGCGGCGCTGCCGGCGGAGCAGGCTAGGGCCTATTTCGTGAATTTCAACGCTGCGTTTCATGAAGCGTGTAAAAAACAGTTGTCGTGGGTCGTATCCGACCCGAAAATCAGAGAAGAAATCAAAGGGTCGATAGGTTCGAAGGTGGAGCAAAAGTACAGCGAATTCTACGAGAAGAATCGGGTCGGGTCGGAGTCCGTTACGAAGCTTTTACCCGACGATATAGGGAATCACATGTCTAACATTTTGAATGGGAACGGGATTGGAGATTCGAGTGTCTCGTCACATTCTTCGTCAACGACGTCGTCTTCTCATCGCTCTAATCGACGGTGA 1878 0.5437 MPRKGMRSIFFKPSPPPPATSSLPPPSPLRTFSDSIMEENIQTAESLITKWDDSNANYRTKFPIPLFSGPRHEAKQYLNAVKGLQAAMQHLVAQDSSSTTLVRAQFLMQLAMKTLQKEFYQILSSNRDHLDPETVSTRSSVDRRSSVSDYVSDYDDEISISISEDEYRVSETERVSMLAMDDLKAIAECMISSGYGKECVKVYIIMRKSIVDEALYHLGMERLSFSQVQKLDWEVLELKIKSWLKAAKVAVGTLFHGEWILCDHVFGADSGKRVAESCFAEIAKDGAASLFGFPEMVAKCKKTPEKMFRTLDLYEAISDHWPQIESIFSFESTSNIRLQAVTSMVKLGEAVRTMLTDFETAIQKDASKKPAPGGGIHPLTRYVMNYLTFLADYSGVLVDIIADSPQSPLPESYFRSPMREENAAASELSERIAWIILVVLCKLDGKAELYKDVALSYLFLANNTQYVVVKVRKSNLGFLLGEEWLAKQEAKAREYASKYERVGWGAVLASLPENPAAALPAEQARAYFVNFNAAFHEACKKQLSWVVSDPKIREEIKGSIGSKVEQKYSEFYEKNRVGSESVTKLLPDDIGNHMSNILNGNGIGDSSVSSHSSSTTSSSHRSNRR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00700 625 MobiDBLite consensus disorder prediction 596 625 - -
Cca04g00700 625 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 21 605 - -
Cca04g00700 625 MobiDBLite consensus disorder prediction 11 25 - -
Cca04g00700 625 MobiDBLite consensus disorder prediction 1 32 - -
Cca04g00700 625 Pfam Exo70 exocyst complex subunit 241 594 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca04g00700 625 Gene3D Exocyst complex component Exo70 60 604 - -
Cca04g00700 625 PANTHER EXOCYST COMPLEX PROTEIN EXO70 21 605 IPR004140 GO:0000145|GO:0006887
Cca04g00700 625 SUPERFAMILY Cullin repeat-like 44 595 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00700 Cca-Chr4 6877032 6879251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00700 10 601 EXO70 exocyst subunit family AT5G59730 48.276 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00700 K07195 - gmx:100810579 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00700 04 6877032 6879251 Cca04g00700 04 6877032 6879251 ECH