Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00685 ATGGAAAACCTGGATTCGGTGTTCATTTACCATGAGGGAGAACACGAGTTAAGGCAGAAGCTTATCAATGCCACCCTTCAACTTGAGAACATGAAAATTGTGAGAACAGAACTGTTCAATCTGTTAAATATGGCTTACAAAGAGAGGGATGAAGCAAGGTGTCAGCTACAGAAATTGATGAACCAACTCATGCCCTCTAGCCCAACAAATTTGCAAAACGTGTTTGATAACCAAAGCTTTATGATGTTCCCTTATGCTAAGGCAAACTCAAGCATAACAGAATCTGACAATAGTGGTTCCCAAGTGGATTCCTTCTTTGACACTGTCTCTTCTCCAGAGTTTACAAACATCAATGCAGTTGACCCTATTAACAAAATGAGTTATCTCAATCAGCACTTGGTTGTTCAGGACATCAATTTCTCAGCAACACATGCTTTGATGGCCCCTTCAGAGAAGCCCGTGTCTGATACTGCCACTGCAATCATAGATAGTATTGCCAAAGAAAGAGGTTTGCCTCAAAAAGGTAAACTCCTTCAGGCTGTGGTGGATGCTGGTCCATTGCTTAAAACTTTGCTCCTTGCAGGGCCACTTCCTACATGGAGAAACCCCCCTCCTTTACAAAACCTCAAACTTCCAGTTCCACCCTTAGCCATCAAAAAGTGTGATACCACTAGCATTGAGCCTAACACTTTTGGAGACACTGGAAATTCACTTCTAAAACCAAAGCTTTCACCCTTGCATTCATCAAATGCTCCCTCCACTTGTTCAGCTTCCATGCTCAACTTTGCTGGTCAAAGTCAAACTACTGGTTCATGGAACAATGCATGGCAGTTGAATTCATCTTCTGGTGTTGGCATCCAAGTAGCACCATCAAGGAAGCGGCAAAGGCATCAATGTTTTGATGAAATTTTTATCCCCGAGACCTTTTCTTCCACTGTGTAA 942 0.4246 MENLDSVFIYHEGEHELRQKLINATLQLENMKIVRTELFNLLNMAYKERDEARCQLQKLMNQLMPSSPTNLQNVFDNQSFMMFPYAKANSSITESDNSGSQVDSFFDTVSSPEFTNINAVDPINKMSYLNQHLVVQDINFSATHALMAPSEKPVSDTATAIIDSIAKERGLPQKGKLLQAVVDAGPLLKTLLLAGPLPTWRNPPPLQNLKLPVPPLAIKKCDTTSIEPNTFGDTGNSLLKPKLSPLHSSNAPSTCSASMLNFAGQSQTTGSWNNAWQLNSSSGVGIQVAPSRKRQRHQCFDEIFIPETFSSTV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00685 313 Coils Coil 42 62 - -
Cca04g00685 313 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 298 - -
Cca04g00685 313 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 298 IPR012862 -
Cca04g00685 313 Pfam Protein of unknown function (DUF1635) 15 225 IPR012862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00685 Cca-Chr4 6715157 6717911 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00685 - - gmx:100776018 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00685 04 6715157 6717911 Cca04g00685 04 6715157 6717911 ECH
Cca10g00447 10 4623844 4627210 Cca04g00685 04 6715157 6717911 PCT