Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g00677 | ATGCGTTTAACTAGCGCTTTTCTTCTCACCTTACCTCCATTTCTAAGTGTGCGTGTGCGTCATTACTCATCAACCAAGTTGTTTGTCGCAGGGCTTTCCTACGATACTAATGAACCGGTTCTCAGAGACGCCTTTGGACAACACGGTGAAATTATTGAAGTTAAAATAATATGTGATCATGTTACTGGAAAATCAAGAGGATATGGATTTGTACGGTTCGTTTCTGAAACTATAGCTGCTACAGCTCGCAAAGAAATGCACGCCCAGATATTAGATGGAAGACGCATTCGGGTGAGTTATGCGCACAAAGGGTAG | 315 | 0.4254 | MRLTSAFLLTLPPFLSVRVRHYSSTKLFVAGLSYDTNEPVLRDAFGQHGEIIEVKIICDHVTGKSRGYGFVRFVSETIAATARKEMHAQILDGRRIRVSYAHKG | 104 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g00677 | 104 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 25 | 103 | IPR000504 | GO:0003723 | |
Cca04g00677 | 104 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 13 | 103 | - | - | |
Cca04g00677 | 104 | Gene3D | - | 16 | 104 | IPR012677 | - | |
Cca04g00677 | 104 | SUPERFAMILY | RNA-binding domain, RBD | 10 | 103 | IPR035979 | GO:0003676 | |
Cca04g00677 | 104 | SMART | rrm1_1 | 26 | 99 | IPR000504 | GO:0003723 | |
Cca04g00677 | 104 | PANTHER | GLYCINE-RICH RNA-BINDING-LIKE PROTEIN-RELATED | 13 | 103 | - | - | |
Cca04g00677 | 104 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 27 | 97 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g00677 | Cca-Chr4 | 6631388 | 6633644 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g00677 | 19 | 98 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 28.750 | 1.14e-08 | 49.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g00677 | K13195 | - | gmx:100306540 | 166.777 |