Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00654 ATGGTATTACAGTTTCCTTATACTCTAATTAATAAACAATGTAGGGGTATATACAGTGTTTTAAAACCCGGACCGACCCGGCCGGTCGCATGGGTGGTGGAAGCTCGAATCCCAGGTGTTTACTCTGGCGGCGCGTGGCAAGGTGCTCACGCCACCTTCTACGGAGGCTCCGACGCTTCCGGCACCATGGCTCGAATCCCAGGTGTTTACTCTGGCGGCGCGTGGCAAGGTGCTCACGCCACCTTCTACGGAGGCTCCGACGCTTCCGGCACCATGGGTCGGTAa 285 0.5649 MVLQFPYTLINKQCRGIYSVLKPGPTRPVAWVVEARIPGVYSGGAWQGAHATFYGGSDASGTMARIPGVYSGGAWQGAHATFYGGSDASGTMGR 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00654 94 PANTHER EXPANSIN-A15 64 93 IPR002963 GO:0009664
Cca04g00654 94 PANTHER EXPANSIN-A15 30 64 IPR002963 GO:0009664
Cca04g00654 94 PANTHER EXPANSIN 64 93 - -
Cca04g00654 94 PANTHER EXPANSIN 30 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00654 Cca-Chr4 6448647 6450913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00654 64 93 Expansin Gene Family AT2G39700 93.333 3.96e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00654 - - lja:Lj0g3v0020719.1 72.4034