Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00648 ATGGAAGCAAATTTTCCCTTTGGTGAAGAAGAAAAAGATGAGAGCATATTATATGTCTCCGATTCTCTTGGTTTTGCAGCCACGGATCTTTCGTTGGAAGACAAAGACAACGATTTCTCAGAAACCGCAAAGTTCATAAGCCAGATCCTCATGGAAGAGAACGTGGAACATAGGCCTTTCTATGACTCTTTCTCCTTGCAAGTTACAGAGAAATCCTTCTACCACGCTCTCATCGGTAACCTTCCTCATTCCCCCAATCAACACCCTCTTGTTCTTAGTCCTGAACCTGAAATCACCACCAGCAAAACCAACTTTTTAGACCAAAATTCTAGTGA 335 0.4209 MEANFPFGEEEKDESILYVSDSLGFAATDLSLEDKDNDFSETAKFISQILMEENVEHRPFYDSFSLQVTEKSFYHALIGNLPHSPNQHPLVLSPEPEITTSKTNFLDQNSS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00648 111 MobiDBLite consensus disorder prediction 87 111 - -
Cca04g00648 111 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 24 86 - -
Cca04g00648 111 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 24 86 IPR005202 -
Cca04g00648 111 MobiDBLite consensus disorder prediction 93 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00648 Cca-Chr4 6371834 6372168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00648 32 111 GRAS Transcription Factor Family AT2G29060 40.476 1.29e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00648 - - gmx:100795855 130.954