Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00641 ATGGGAAACGGCATAGGGAAGCTAACGGTGTGCTTCACCGGGAACAACGGCGGGGGGAGGCGGAAGCAGGACATATCGATTCTGATAACGGAGCCTCTAGACGAGGGTTTGGGGCACTCGTTCTGCTACGTGAGACCCGACCCGACACGGGTCTCGTCGTCCAAGGTCCACTCGGAGGAAACGACGACGTTTCGAACAATCTCGGGGGCGTCGGTGAGCGCGAACACGTCGACGCCGTTGTCAACGGCGTTCGTTGACCTTTACTCGTACGGATGCATCGACAGGGCCGCGGCGTTCGAGAGTTCAACCTCGTTCGCCTCGCTCCCTCTGCAACCGATTCCGCGGAACCACGCCAACTCTGGGCCCTTCTCGGGGAACTTGGGAACGGCCTTTCCGGGCTCGGGCCCGCTGGAGAGAGGGTTCATGTCGGGCCCAATCGAGCGCGGGTTCATGTCCGGGCCCATCGATCGCGCCCTGTTTTCGGGTCCCATGGAGAGGGAAGCGAATGGAAACGGATCGGATCAGTTTCAGAGAAGCTTCTCACACGGTGGTTTGGGATTAGGGTTGAGAGTGAGGACTAGGAAGGGACGCTGGATTCGCGTTCTGCAGAGGGCGATTTCCAAGACTCTGTCTCGGGGGCAGAGCTCGATTGTAGCTCCGATCAAGGGGGTGGTCGTCAAGGAGCCCGACTGGATggtggcggcggcggcggcggcggcCACGGAGAAGCACCACAATGAGAATCTCAGTGTCAATTTGAGCAGTGAAGGGAGTTTGGAGGATGATGATTCCATGGAGAGTCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGGGAGGATCGTGTTCATGTTGTTGTGTCTGAGGAACACGGTTGGGTTTTCGTGGGGATCTATGATGGTTTCAGTGGACCTGATGCACCTGATTACCTTCTCTCAAATCTCTACAACTCCGTGCACAAGGAGCTCAAAGGGTTGTTGTGGGATGACGGCTCTGCCCCGGAGAATTCCGTGGCAAAAGAGGACACGTTCGGAGATGTTAATGTTACAGATGTGGATGCTTGTTCTCACTGTGTTGAGCAAGAGAATAGCAATAGGACTAAGAAGGGTAGGAATTCGAGGAGCAAGTTCAAAGGTGCTGCGAAGAAATGGGAGGAGAATCAACGGAGGTGGAAGTGTGAATGGGATAGGGAAAGGTTAGAGCTTGATCGGAGGTTGAAGGAGCAATTGAGTTTGAGTCGATCTGGGTCTGGTGGAACGAGTTCTATTAATCATGGGGATGTGTTGGAGGCTCTGTCTCGGGCTCTGAGGAAGACTGAGGAGTCTTATCTCGATGTTGCTGATAAGATGGTGATGGAGAATCCGGAACTTGCTTTGATGGGTTCGTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTTTATGTGATGAATGTGGGGGATAGTCGCGCCGTGTTGGCTCAGAAGGCTGAGCCTGATTACTGGCTTGGGAAAATCAGACAGGACTTGGAGAGGATCAATGAGGAGACAATGAATGATCTTGAATCTTGGGATGTCGACACCTCCAACTTGGTTCCGAGTTTGAGTGCGATTCAGCTCACTAAGGATCATAGTACCAGTGTTGAGGAAGAAGTCCAGAGAATCAAAAAGGAGCATCCGGATGATCCTTGTGCTGTAGTAAATGACCGTGTAAAGGGTTCTCTCAAGGTTACTCGAGCATTTGGTGCTGGATTTCTCAAACAGGATATATACACTCTCTCGCGGGTTTCAATAAATCCAATAACTAGCCTAATCCTTGGAATATGGAAGCAGAAAAATTTGTTACTGCTAGTATTAGCTGTGATACTGAAGTAA 1851 0.5105 MGNGIGKLTVCFTGNNGGGRRKQDISILITEPLDEGLGHSFCYVRPDPTRVSSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNHANSGPFSGNLGTAFPGSGPLERGFMSGPIERGFMSGPIDRALFSGPMEREANGNGSDQFQRSFSHGGLGLGLRVRTRKGRWIRVLQRAISKTLSRGQSSIVAPIKGVVVKEPDWMVAAAAAAATEKHHNENLSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFSGPDAPDYLLSNLYNSVHKELKGLLWDDGSAPENSVAKEDTFGDVNVTDVDACSHCVEQENSNRTKKGRNSRSKFKGAAKKWEENQRRWKCEWDRERLELDRRLKEQLSLSRSGSGGTSSINHGDVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDTSNLVPSLSAIQLTKDHSTSVEEEVQRIKKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQDIYTLSRVSINPITSLILGIWKQKNLLLLVLAVILK 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00641 616 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 16 584 - -
Cca04g00641 616 Gene3D - 234 595 IPR036457 -
Cca04g00641 616 PANTHER PROTEIN PHOSPHATASE 2C 16 584 IPR015655 GO:0004722|GO:0006470
Cca04g00641 616 CDD PP2Cc 423 601 IPR001932 -
Cca04g00641 616 ProSiteProfiles PPM-type phosphatase domain profile. 262 616 IPR001932 -
Cca04g00641 616 SMART PP2C_4 263 611 IPR001932 -
Cca04g00641 616 Pfam Protein phosphatase 2C 419 603 IPR001932 -
Cca04g00641 616 SUPERFAMILY PP2C-like 276 581 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00641 Cca-Chr4 6329110 6332502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00641 1 604 PP2C-type Phosphatase Gene Family AT1G07630 62.319 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00641 - - gmx:100810214 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00641 04 6329110 6332502 Cca04g00641 04 6329110 6332502 ECH