Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g00639 | ATGGGGGTTTGTTTGAGCTCCCAAAATAAAGCTGGCCGCTTATGTAACACTGAGTTAAATTCAAAGCATGTGAGTGCCGATGCAAAAGATCCTAGCAGTTCAAGAAGTGAAGTTACAAATGATCTCAGCAGCACAATTGATAAGGTCTCAGAGGTTACAGTGCCTCAGACTCCCCAGAGTGAGGGTGAGATCTTGCAGCCATCCAATCTGAAGAACTTTAGTTTGACAGAACTTACAGCTGCCACAAGAAATTTCCGTACAGACAGTGTGTTAGGAGAAGGTAGTTTTGGATCAGTTTTTAAGGGCTGGATTAATGATCAATCACTGTCTGCTGCCAAACCTGGCACGGGGATTGTTGTTGCTGTGAAAAGAATTGATAAGGATAGCTTCCAAGGTCAACAGGATTGGTTGGCTGAAGTTAACTATCTAGGACAGCTTTCTCATCCCCATCTAGTGAAATTAATTGGGTATTGCTTTGAAGATAAAAGCCGTCTTCTGGTGTATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATATTTTCAACCTCTTTCTTGGGGCCTCCGTTTGAAAGTGGCACTTGGAGCTGCCAAAGGGCTTGCATTTCTTCACAGTGCCGAAACAAAAGTGATATACCGAGATTTCAAGACTTCAAATGTCTTGCTGGATTCAAATTATAATGCAAAGCTTGCTGATTTGGAGCTGGCAAAGGATGGGCCAACACGTGACAAAAGTCATGTCTCCACCAGGGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACAGGCCATCTGAGTGCTAAGAGTGATGTCTTCAGTTTTGGAGTTGTGCTGCTGGAAATGTTATCAGGAAGGAGAGCTGTGGACAAGAACAGACCATCAGGACAGCAAAATTTGGTGGAATGGGCAAAGCCATACCTAGCCAACAAGAGAAAGCTTTTGCGTGTGTTGGATAATCGTCTTGAAGGCCAATATGCATTAGATGAGGCCTATAAGGTAGCCACACTCTCTCTGCGATGTCTTGCAACAGAATCCAAGTTGAGACCAAACATGGACGAGGTTGTCACAGATTTGGAGCAGCTTCAGCTTCCCCATGTAAACCAAAATCGTTCTGTGAATGCCTCTTGTGGTCGTAGAAAAAGTGCTGATGATTTCACCCAAGGTAGAACCGCCAAAGTTTCAGTTTCCCCACTCTCACATGACATTGCAAATACACGTGTTTGA | 1251 | 0.4412 | MGVCLSSQNKAGRLCNTELNSKHVSADAKDPSSSRSEVTNDLSSTIDKVSEVTVPQTPQSEGEILQPSNLKNFSLTELTAATRNFRTDSVLGEGSFGSVFKGWINDQSLSAAKPGTGIVVAVKRIDKDSFQGQQDWLAEVNYLGQLSHPHLVKLIGYCFEDKSRLLVYEFMPRGSLENHLFMRGSYFQPLSWGLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYNAKLADLELAKDGPTRDKSHVSTRVMGTYGYAAPEYLATGHLSAKSDVFSFGVVLLEMLSGRRAVDKNRPSGQQNLVEWAKPYLANKRKLLRVLDNRLEGQYALDEAYKVATLSLRCLATESKLRPNMDEVVTDLEQLQLPHVNQNRSVNASCGRRKSADDFTQGRTAKVSVSPLSHDIANTRV | 416 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g00639 | 416 | ProSiteProfiles | Protein kinase domain profile. | 85 | 370 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca04g00639 | 416 | MobiDBLite | consensus disorder prediction | 22 | 44 | - | - | |
Cca04g00639 | 416 | Pfam | Protein tyrosine and serine/threonine kinase | 87 | 367 | IPR001245 | GO:0004672|GO:0006468 | |
Cca04g00639 | 416 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED | 40 | 381 | - | - | |
Cca04g00639 | 416 | MobiDBLite | consensus disorder prediction | 378 | 397 | - | - | |
Cca04g00639 | 416 | SUPERFAMILY | Protein kinase-like (PK-like) | 61 | 367 | IPR011009 | - | |
Cca04g00639 | 416 | PANTHER | OS01G0588500 PROTEIN-RELATED | 40 | 381 | - | - | |
Cca04g00639 | 416 | ProSitePatterns | Protein kinases ATP-binding region signature. | 91 | 123 | IPR017441 | GO:0005524 | |
Cca04g00639 | 416 | CDD | STKc_IRAK | 91 | 370 | - | - | |
Cca04g00639 | 416 | Gene3D | Transferase(Phosphotransferase) domain 1 | 171 | 391 | - | - | |
Cca04g00639 | 416 | Gene3D | Phosphorylase Kinase; domain 1 | 55 | 170 | - | - | |
Cca04g00639 | 416 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 216 | 228 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g00639 | Cca-Chr4 | 6310050 | 6313784 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g00639 | 71 | 367 | Glycoside Hydrolase | AT3G07070 | 50.166 | 1.50e-98 | 298 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Cca04g00639 | PK_Tyr_Ser-Thr | 3.4e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g00639 | - | - | gmx:100809679 | 685.256 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca04g00639 | 04 | 6310050 | 6313784 | Cca04g00639 | 04 | 6310050 | 6313784 | ECH | |
Cca10g00412 | 10 | 4287619 | 4290644 | Cca04g00639 | 04 | 6310050 | 6313784 | PCT |