Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00638 ATGAAGTGTTTCTATTTCTCCAACGAGGAAGACGACGACGGATCCGCCGCGCCGGCGCAGGCGAGCTCGCGCGGCTCCCGCGTCTCGTGGGCGCGGTCCCTCAGCCTCATGGACACGCGCAGCAGCAGCCGCTCCCAATTCGACTCCGACTCCACCGAAACCCTAGACTTCCACCTCTTCCTCGCGCAGCGCCGCGCCAACGACCTCCGCGTCCAGATGAACCGCAACGGCCACCAGGGGCACAAGGAGTGGATCAACGAGGTGAATTTGCTGGGAGTGGTGAAGCACGCCAATCTGGTGAGGTTGGTTGGGTATTGCGCTGAGGATGACGAGAGAGGGATTCAGAGGCTTCTGGTTTACGAGTTTATGCCCAATAAGAGCTTGGAAGATCATCTCTTGGCTCGTGTTCCTTCCTCGGTTCTCCCTTGGGGGACCAGGTTGAAGATTGCGCAGGATGCCGCTCGTGGTTTGGCGTATCTTCATGAAGAAATGGATTTTCAGCTAATATTTCGAGATTTTAAGACATCCAACATCTTGCTAGATGAGAATTTCAATGCAAAGCTTTCTGATTTTGGATTGGCTAGGCAAGGACCCTCAGAAGGATTTGGCTATGTTTCAACAGCAGTTGTTGGCACCATAGGTTATGCTGCACCAGAGTATGTTCAGACCGGTAAGCTTACTTCTAAGAGTGATGTGTGGAGCTTTGGTGTAGTTCTTTATGAGCTTATCACTGGGAGGAGAGCTGTAGAGAGAAACCTACCAAGAAATGAACAAAAGCTTCTGGAGTGGGTAAGACCTTATGTTTCTGATCCTAGGAAGTTCCATCATATTGTAGACCCCCGACTTGAAGGACAATATTGCATCAAATCTGCTCATAAACTTGCAACCCTAGCAAACAAGTGCCTCATGAAGCAGCCAAAATCCCGTCCAAAAATGAGTGAGGTGGTTGAATCTCTTGGATGCATTATTAATGAGACAGTTCCTCAGGATGAACACATACCCCAAGCTGCTGTAGCAACTGGAGATGAAAAAGAAGAAAAGTTGTCTGTAGAGGACACTGAACCTGAACCAGCTAAACATGGGAACAATTACCTGAAGAAGGTCTTTGAATTGAGAGACAAGGTCAGCTTAAGAAATAAGTCTATTGGAAGGTTGGATTGGAAAAGTTGGGCTCCTGGGCTAGTAAGAACTTGGTGA 1197 0.4896 MKCFYFSNEEDDDGSAAPAQASSRGSRVSWARSLSLMDTRSSSRSQFDSDSTETLDFHLFLAQRRANDLRVQMNRNGHQGHKEWINEVNLLGVVKHANLVRLVGYCAEDDERGIQRLLVYEFMPNKSLEDHLLARVPSSVLPWGTRLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDENFNAKLSDFGLARQGPSEGFGYVSTAVVGTIGYAAPEYVQTGKLTSKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDPRKFHHIVDPRLEGQYCIKSAHKLATLANKCLMKQPKSRPKMSEVVESLGCIINETVPQDEHIPQAAVATGDEKEEKLSVEDTEPEPAKHGNNYLKKVFELRDKVSLRNKSIGRLDWKSWAPGLVRTW 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00638 398 PANTHER OS01G0588500 PROTEIN-RELATED 72 350 - -
Cca04g00638 398 Gene3D Phosphorylase Kinase; domain 1 63 123 - -
Cca04g00638 398 MobiDBLite consensus disorder prediction 336 361 - -
Cca04g00638 398 MobiDBLite consensus disorder prediction 337 361 - -
Cca04g00638 398 Gene3D Transferase(Phosphotransferase) domain 1 124 342 - -
Cca04g00638 398 MobiDBLite consensus disorder prediction 1 26 - -
Cca04g00638 398 ProSiteProfiles Protein kinase domain profile. 1 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g00638 398 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 72 350 - -
Cca04g00638 398 SUPERFAMILY Protein kinase-like (PK-like) 78 319 IPR011009 -
Cca04g00638 398 Pfam Protein kinase domain 74 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00638 Cca-Chr4 6305603 6308698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00638 72 353 Glycoside Hydrolase AT3G07070 47.569 6.07e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Cca04g00638 Pkinase 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00638 - - gmx:100305425 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00638 04 6305603 6308698 Cca04g00638 04 6305603 6308698 ECH