Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g00626 | atggaagaagaagaggaagaagggagaagtaacaagcaatcagcacttagtctTGCTGATGAGACTGACCTATCAGAGGCTATTGATCGGGTGTTTCTAAGCGACGAAAACGTGTGTATTGAACATTATTTGCAAAGTGGAGGGAAGGGTCGTTCTAAGAAAAAAGGGAGGAAGAAAGAAACAGTGGAGTTGAGGAATCTTCTGTTGATGTGTGCACAATCTATCTATGCCAATGACAACAGAACTACCAATGAATTGTTAAAGCAGATAAGGCAGCACTCTTCTCCCTTTGGCGATGCATCACAGAGGTTGGCTCATTACTTTGCCAATGGCCTCGAGGCACGCTTGGTTGGTGATGGGCTGATGGCACGAGTGCACAAGGAATGTTTTCTGTTTTGA | 399 | 0.3885 | MEEEEEEGRSNKQSALSLADETDLSEAIDRVFLSDENVCIEHYLQSGGKGRSKKKGRKKETVELRNLLLMCAQSIYANDNRTTNELLKQIRQHSSPFGDASQRLAHYFANGLEARLVGDGLMARVHKECFLF | 132 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g00626 | 132 | ProSiteProfiles | GRAS family profile. | 55 | 132 | IPR005202 | - | |
Cca04g00626 | 132 | Pfam | GRAS domain family | 64 | 120 | IPR005202 | - | |
Cca04g00626 | 132 | PANTHER | GRAS FAMILY TRANSCRIPTION FACTOR | 3 | 125 | - | - | |
Cca04g00626 | 132 | PANTHER | OSJNBA0084A10.13 PROTEIN-RELATED | 3 | 125 | IPR005202 | - | |
Cca04g00626 | 132 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g00626 | Cca-Chr4 | 6216832 | 6217230 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g00626 | 2 | 120 | GRAS Transcription Factor Family | AT1G07530 | 45.000 | 6.49e-29 | 108 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GRAS | Cca04g00626 | GRAS | 2.1e-13 | CL0063 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g00626 | - | - | gmx:100794790 | 174.096 |