Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00589 ATGGATGGGCACATGCAGGGCATGGGGGGGATGCAACCagcggcgccttcatcatcatcatcatcatctaacagcagcatgagcatgggcatgggcatgggcatgatgatgcatgataagATGATGATGCACATGACGTTCTTCTGGGGGAAAGACACGGAGATTCTGTTCCACAAGTGGCCCGGGGGCAGAACCGGCATGTACGCGGTGGCCCTCGTCTTTGTCTTCGTGATGGCGCTTCTGGTCGAGTTGATCTCCTCAACCCGGTTCATCAAACCCGGTTCAAACCACGTGCTCGCCGGTCTCTTTAAAACGGTCTTGCACGTCCTCAGAGTGGGCCTCGCTTATTTGGTCATGCTGGCGCTCATGTCCTTCAACGGCGGTGTCTTCCTGGCCGCCCTCCTGGGCCACGCCTTGGGCTTTTTTCTCTCTGCCGTCGCTTTTAACAAACCCACCCAAGATTTGGGCTTTGATCTTCCCCCACTTTCTTGTTAA 495 0.4667 MDGHMQGMGGMQPAAPSSSSSSSNSSMSMGMGMGMMMHDKMMMHMTFFWGKDTEILFHKWPGGRTGMYAVALVFVFVMALLVELISSTRFIKPGSNHVLAGLFKTVLHVLRVGLAYLVMLALMSFNGGVFLAALLGHALGFFLSAVAFNKPTQDLGFDLPPLSC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00589 164 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 19 163 IPR007274 GO:0005375|GO:0016021|GO:0035434
Cca04g00589 164 MobiDBLite consensus disorder prediction 12 26 - -
Cca04g00589 164 PANTHER COPPER TRANSPORTER 6-LIKE 19 163 - -
Cca04g00589 164 MobiDBLite consensus disorder prediction 1 26 - -
Cca04g00589 164 Pfam Ctr copper transporter family 97 143 IPR007274 GO:0005375|GO:0016021|GO:0035434
Cca04g00589 164 Pfam Ctr copper transporter family 45 89 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00589 Cca-Chr4 5908970 5909937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00589 46 164 Inorganic Solute Cotransporters AT5G59030 49.194 6.12e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00589 K14686 - gmx:100306175 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00589 04 5908970 5909937 Cca04g00589 04 5908970 5909937 ECH