Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g00582 | ATGCTTGAAGATGATAGGGTGGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTCCTAGAGGAGGCACGTGCAGTGGGGCAGCTAAGGAATGAGCGTTTAGCTAACTTGGTTGGATGTTGCTGTGAGGGGGAGGAGAGATTGCTTGTGGCAGAGTTCATGCCTAATGAAACACTCTCCAAACATCTTTTTCACTGGGAAAGCGAGCCTATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCTCAAGCTTTGGAATACTGCAGCAGTAAGGGAAGGGCATTGTACCATGATCTTAATGCTTATAGAATTTTGTTTGACCAGGAAGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAACAGTAGGGATGGCAGAAGCTACAGTACGAATTTAGCCTTCACTCCTCCAGAGTACTTGAGGACAGGAAGGATCACTGCTGAAAGTGTAGTTTACAGTTTTGGCACCCTATTGCTTGATCTTCTGAGTGGAAAGCATATCCCTCCCAGTCATGCACTTGACCTTATACGAGGTAAAAATTTTCTGATGCTGATGGACTCATGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCGCGATGTTTACAATATGAACCTCGTGAGAGACCAAATGTTAAGTCGCTTGTGACTGCTCTATCCTCTCTTCAGAAAGAAACTTCGATACCGTCAAATGTTTTAATGGGCATACCAGATAGGAGTCTGTCATCAAAGGAAACAGTTTCATTGACACCTTTCGGTGATGCTTGTTCAAGAAGAGATCTGACTGCAATACATGAAATTTTGGAAAAGGTGGCATACAAGGATGATGAAGATGTTGCAAATGAGCTGTCCTTCCAAATGTGGACAAATCAAATACAAGAAACTCTAAATTCTAAGAAGCAAGGCGATTCTGCTTTTCATGCTAGAGACTTCTCAAAGGCCATTGACTGCTATACACAGTTTATCGACGGTGGAACCATGATATCACCAACCGTGTATGCCAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCAATATCTCCCGCCTGGCCAACTGCATACTATCTTCAAGCAGCTGCTCTCTTCAACCTTGGCATGGACAATGATGCACAGGAAAGTCTTAAAGATGGCACAACACTCGAAACCAGGAAGTATAGAAATTGA | 1248 | 0.4375 | MLEDDRVVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWESEPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNVKSLVTALSSLQKETSIPSNVLMGIPDRSLSSKETVSLTPFGDACSRRDLTAIHEILEKVAYKDDEDVANELSFQMWTNQIQETLNSKKQGDSAFHARDFSKAIDCYTQFIDGGTMISPTVYARRCLCYLMNDMAQEALGDAMQAQSISPAWPTAYYLQAAALFNLGMDNDAQESLKDGTTLETRKYRN | 415 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g00582 | 415 | SUPERFAMILY | TPR-like | 314 | 405 | IPR011990 | GO:0005515 | |
Cca04g00582 | 415 | PANTHER | PROTEIN KINASE, PUTATIVE-RELATED | 2 | 415 | - | - | |
Cca04g00582 | 415 | ProSiteProfiles | Protein kinase domain profile. | 1 | 237 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca04g00582 | 415 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 2 | 415 | IPR045845 | GO:0004672|GO:0009742 | |
Cca04g00582 | 415 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 58 | - | - | |
Cca04g00582 | 415 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 240 | IPR011009 | - | |
Cca04g00582 | 415 | Pfam | Protein tyrosine and serine/threonine kinase | 5 | 234 | IPR001245 | GO:0004672|GO:0006468 | |
Cca04g00582 | 415 | Gene3D | Tetratricopeptide repeat domain | 308 | 414 | IPR011990 | GO:0005515 | |
Cca04g00582 | 415 | Gene3D | Transferase(Phosphotransferase) domain 1 | 60 | 252 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g00582 | Cca-Chr4 | 5847622 | 5851610 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g00582 | 7 | 237 | Glycoside Hydrolase | AT3G07070 | 34.884 | 2.02e-37 | 139 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Cca04g00582 | PK_Tyr_Ser-Thr | 8.2e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g00582 | - | - | gmx:732542 | 804.668 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca04g00582 | 04 | 5847622 | 5851610 | Cca04g00582 | 04 | 5847622 | 5851610 | ECH |