Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00579 ATGGCCTCCCTAGCACTCAccaccaccgccctcccctccctccgcctccgcctccgccGCAACTCTACCACCGTCAAACCACGCCGCTTCGCCTCCATTCCTCTCAAACAAAACCTCCACGCTTCCATTTCCACTTTCCCTAATTTCTCACTCAAAAAACCGAACCTCGTTTCAAATCGCAAACTCCCCTCTCTCACCGTCCGAGCCTCCGCCGCCTCCATCACTCCGGCGCCGGCGCCGGCACCACCTCAGCCATGGCAAGGCGCTTCAATAAAACCTTTACTAGCCTCCGTCGCGACGGGAGTCTTACTCTGGTACTCTCCCGTTCCCGCCGGCGTGAACCGCAACGCGTGGCAGTTACTCGCGATTTTCCTCGGCACAATCGTCGGCATTATAACGCAACCGTTACCCCTCGGCGCGGTGGCGATTTTAGGCTTGGGCGTTTCCGTCCTCACCAAAACCCTACCGTTCGCCGCCGCGTTCTCCGGCTTCGGCGACCCCATCCCGTGGCTCATCGCGCTCGCGTTCTTCTTCGCCAAGGGATTCATCAAGACCGGCCTCGGAAACCGCGTGGCGTACCAGTTCGTGAAGCTCTTCGGTAGCTCCTCGCTAGGGTTAGGTTACAGCTTGGTCTTCAGCGAGGCATTGCTGGCGCCGGCGATTCCCTCTGTGTCGGCGAGGGCGGGGGGGATTTTCCTGCCGCTGGTGAAGGCGCTCTGCGTGGCGTGCGGGAGCAACGCCGGCGACGGGACGGAGAACAGGTTGGGGGCGTGGCTGATGCTTACTTGTTTTCAGACTTCGGTGATTACGTCGGCGATGTTTCTGACGGCGATGGCGGCGAATCCTCTGTGCGCGACGCTTACGTTGAACTCGATTAATCAGACGATAGGGTGGTTGGATTGGGCCAAGGCTGCTATTGTTCCGGGGTTGGCGTCGTTGGTGTTGGTGCCGTTGATCTTGTATGTTATATACCCGCCGACGCTGAAGAATAGTCCAGATGCTCCTAAGCTTGCGAAGGAGAAGTTGGAGACGATGGGGCCCATGACTGCCCATGAGAAGATCATGACCGCCACTCTGTTTCTCACGGTGGGACTTTGGGTATTTGGAGGGCTTCTTAATATTGATGCTGTATCTGCTGCAATTCTTGGATTAGCTGTACTTCTTGTCACTGGGGTTGTAACATGGAAGGAGTGA 1194 0.5519 MASLALTTTALPSLRLRLRRNSTTVKPRRFASIPLKQNLHASISTFPNFSLKKPNLVSNRKLPSLTVRASAASITPAPAPAPPQPWQGASIKPLLASVATGVLLWYSPVPAGVNRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFAAAFSGFGDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKALCVACGSNAGDGTENRLGAWLMLTCFQTSVITSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLASLVLVPLILYVIYPPTLKNSPDAPKLAKEKLETMGPMTAHEKIMTATLFLTVGLWVFGGLLNIDAVSAAILGLAVLLVTGVVTWKE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00579 397 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 6 397 - -
Cca04g00579 397 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 6 397 IPR030676 -
Cca04g00579 397 Pfam Sodium:sulfate symporter transmembrane region 91 396 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cca04g00579 397 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 108 397 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00579 Cca-Chr4 5829383 5831421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00579 1 397 Antiporters AT5G12860 71.891 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00579 - - gmx:100793559 649.818