Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00519 ATGGAGGATAGAAATAACTGTGGTGAATGTTGGCAAAGAAACAGTGTAGATAATGGTGCTGAATGCATGGAGGAAGTAGATGAACTAGATGTAATTATGCATGATAGCATGAATGGGGATATTGAACTTTGCGAGCCAGCACCAGGGATGTCATTTCCATCCAGGGAAGCTGTTAAATCATTTTATAGGCAATATGCTTCTAGAATGGGATTTGGTTTCAAAGTAAGAAACTCAAAAAAAGGCCGTGACGGGAAGTTACAATACTTTATACTAACTTGTTCACGAGAGGGAACTCGCCCTCATTCTTACCTAAATAGGAAGAAGCCAAAGAAAGATCCAACAAGAAGGATCAGGGAAGAAAAGCAAAAGAAGAATGCTAATGGATTTGCATCTTCTTGTCTACGTCTCTTGGGCGCTAATCGAGGCTCCTTGTTTGCGTGTACAGTAAACATGGCCGACCCTGGTGATCTAAAGAAATCTGAATGGATAGATAGAATAAGATCTGAAGGATCCATTCCATTTCTTGATCCAAATAACTGTTCAAATGGTTGGGCTTCACCTCCTGGAGCTGCATTCAAAGTTAGAGGTCCTGAGTATTTTAGGACAAAGGTTAAGATTCCTGCTACTGGTGATAAACCTTTTGTGTGGGCCTTCAATATTCAACTCCCTACCAAGGATAACTACTGTGCAGTGGCATATTTTACAAACAAAGAGCCTATTGCTGAGGGATCTCTGATAGACAAGTTCTTGAAAGGTGATGATGCTTTCAGAAACTCAAGGCTTAAGATGATTGCCAACATTGTCAATGGTCCTTGGATTGTGAGAAAAGCGGTTGGAGAGCAAGCAATATGCATAATTGGGCGTGCCCTTTCATGTAAATACTGTGTGGCAGAGAATTTCATGGAAGTAGATATTGATATTGGTTCTTCCATGGTAGCAACTGCTATAGTTCACTTGGCATTTGGTTACATAACCACTACGACTGTTGATCTGGCTTTCCTTATTGAGAGCCAAGCTGAATCAGAGCTTCCAGAAAAACTGTTAGGTGCATTCAGATTTTCTAACCTCAATCCTGCTTCAGCCAGGAAAATTGAGCCATCATCTGTTTTGAGCACTGATAGTTTACAAAGATCTTCACCCAAAAGATGGTGGAAGATAATAGGGAAGATTCTTCTTAAAGGTTCTCAAGAAAATGGTTCTACTTCTGACTCACAAAATACTAAAACTGTAGATCACAAAAACAGTCCGACTGACTTCAAGAAATGA 1266 0.4013 MEDRNNCGECWQRNSVDNGAECMEEVDELDVIMHDSMNGDIELCEPAPGMSFPSREAVKSFYRQYASRMGFGFKVRNSKKGRDGKLQYFILTCSREGTRPHSYLNRKKPKKDPTRRIREEKQKKNANGFASSCLRLLGANRGSLFACTVNMADPGDLKKSEWIDRIRSEGSIPFLDPNNCSNGWASPPGAAFKVRGPEYFRTKVKIPATGDKPFVWAFNIQLPTKDNYCAVAYFTNKEPIAEGSLIDKFLKGDDAFRNSRLKMIANIVNGPWIVRKAVGEQAICIIGRALSCKYCVAENFMEVDIDIGSSMVATAIVHLAFGYITTTTVDLAFLIESQAESELPEKLLGAFRFSNLNPASARKIEPSSVLSTDSLQRSSPKRWWKIIGKILLKGSQENGSTSDSQNTKTVDHKNSPTDFKK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00519 421 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 211 356 IPR009769 -
Cca04g00519 421 PANTHER ENHANCED DISEASE RESISTANCE-LIKE PROTEIN (DUF1336) 210 414 - -
Cca04g00519 421 PANTHER ENHANCED DISEASE RESISTANCE-LIKE PROTEIN (DUF1336) 151 209 - -
Cca04g00519 421 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 151 209 IPR045096 -
Cca04g00519 421 MobiDBLite consensus disorder prediction 395 421 - -
Cca04g00519 421 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 210 414 IPR045096 -
Cca04g00519 421 MobiDBLite consensus disorder prediction 100 124 - -
Cca04g00519 421 MobiDBLite consensus disorder prediction 395 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00519 Cca-Chr4 5071278 5078001 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Cca04g00519 DUF1336 1.2e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00519 - - gmx:100795873 457.988