Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00503 ATGACATCCTTGGATATGCCTACCATGGCCTCCTCTCTGCTCCTCCCACTTGGTTCAACTTGTGGTAGAAGACCCTCTTTTACTCCTCCTCAAAGCATTTTGGTGGACAAACTTCGAAGAATAGTTGTTAAAGTTAAATCCTCAGAAAGTGAATGCCCTTCTATGTTTAACAACAATTCACGTAGAGACTTTCTTGGGTTGGCTTTAGGAGTCTCAGGCCTCTTCATCGGTTCATTGGATGCAACTGGAGCTGGTTTGCCCCCAGAGGAAAAGCCAAAACTTTGTGACGACACTTGTCAGAAAGAGCTTGAAAATGTGCCTATGGTAACTACTGCATCAGGTTTGCAATACAAGGACATTAAAGTTGGACAAGGCCCTAGTCCACCAGTTGGATTTCAGGTGGCTGCTAATTACGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCACTGGAGAAAGGTCAGCCTTATATTTTTCGCGTGGGTTCTGGTCAGGTGATACAGGGACTTGATGAAGGTATTCTGAGCATGAAAGTAGGAGGGAAACGTCGACTGTACATACCTGGATCACTGGCATTCCCAAAAGGCCTTACTTCTGCTCCTGGAAGACCAAGGGTGCCTCCGAGCAGTCCAGTCGTATTTGATGTTAGTTTGGAATATATCCCGGGGCTTGAAGTGGATGAGGAATAA 693 0.4517 MTSLDMPTMASSLLLPLGSTCGRRPSFTPPQSILVDKLRRIVVKVKSSESECPSMFNNNSRRDFLGLALGVSGLFIGSLDATGAGLPPEEKPKLCDDTCQKELENVPMVTTASGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQPYIFRVGSGQVIQGLDEGILSMKVGGKRRLYIPGSLAFPKGLTSAPGRPRVPPSSPVVFDVSLEYIPGLEVDEE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00503 230 Gene3D - 93 222 IPR046357 GO:0003755
Cca04g00503 230 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 40 230 - -
Cca04g00503 230 SUPERFAMILY FKBP-like 96 219 - -
Cca04g00503 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC 40 230 - -
Cca04g00503 230 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 131 219 IPR001179 GO:0003755
Cca04g00503 230 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 131 223 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00503 Cca-Chr4 4921727 4925508 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00503 113 219 Calmodulin-binding Proteins AT3G25230 37.963 1.50e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00503 K01802 - gmx:100818743 402.519