Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00404 ATGCCCCTGAAATCTTCAACTGCATTTGCATTTTCCTTAACCTTTTTCCTCTTAATTGCAAATTCACTCACTCTCCAAACCCCATGCTACAAGAACCCTTACAAACAATTCAACCTCATCCTTAACCCAAACGGCACAGTGACGCGCCCAAGCAAACCCCCAGAGAGCCCGCCCGCACTGGATCCCACCCTCCTCGTACTCTCCAAAGACCTCACCATCAACCAATCAAAAGGCACGTGGGCGAGGATCTACCTACCCCGCGAAGCACTGAATCACGCCTCCAAACTCCCCCTTCTAGTTTTCTTCCATGGTGGAGGTTTCATTTTCCTCAGTGCAGCCTCAACCATATTCCACGACTTTTGCTTCAACATGGCGAACGACGTCGTAGCCGTCGTCGCGTCCATCGAGTACCGTCTCGCACCGGAACACAGGCTCCCCGCGGCGTACGAGGATGCCGTGGAGGCGCTGCACTGGATCAAAACCAGCCAAGCCGATGATTGGCTGAGAAGCTACGTCGACTATTCCAATGTTTTTCTCGTGGGGAGTAGTGCCGGGGGAAACATCGCCTACAACGCAGGTCTACGTGCAGCTGCGGGTGATGATCTGGCGCCTGAGATCAAAGGGCTTATATTGGTTCAACCGTTTTTCAGTGGGACCCGCAGGACCGGTTCGGAACTGAGGCTGGCGAATGAACCTCATTTGGCGTTGTGTTACAATGATGCGTTGTGGAAGTTGTCGTTACCCGTTGGGGTTAACCGTGATCACGAGTTTTGCAATCCAACGGCGGGGAATGGTCCTGCCAGATTGGAGATGATCAGACGGCTTGGATGGTGGGTACTGGTTACCGGCTGTGGCGGTGACCCACTTGTGGATCGACAGGTGCAGCTAGTGAGATTGATGCAAAGTAAGGGTGTGAGAGTTGTGGGACATTTTACTCCCGGAGCTTATCATGGGATTCAAGATAGTGAGCCATTAAAGGCAAAGGAGTTATATGGGGAAGGTGGTGTTAATTGTTTAGCCAAATTGCCAGGTGTAGAATCTATTGTGAACATGTTAGAAACAGGCTTGGAGAAGACAATTAATTGTATAGGTTGTGTTGGAAAACAAATCCAGCAGATGATTAGATTCATCCGCCAAGAGGCTGAGGAAAAAGCTAATGAAATATCTGTTGCTGCTGAAGAGGAATTCAATATTGAGAAATTGCAATTACTTGAAGCTGAAAAAAGAAAGATCAGGCAAGAGTATGATCGAAAAGCCAAGCAAATTGATGTTCGTAGAAAAATTGAATACTCAACGCAACTCAATGCATCTCGGATAAAAGTGCTTCAAGCGCAAGATGATGCAATCAATTCTATGAAGGATGCTGCTAGGAAGGCACTTTTACGTGTCTCAAATGATAAAAAAGTATATAGAAAACTCATTAAAGACATGATTGTTCAGGGTTTACTACGCTTGAGGGAACCATCTGTACTAATAAGATGCAGAGAAGGTGATCGAAAGATAGTTGAGTCATTGTTAGAGGAAGTAAAAAAAGAATACACAGAGAAATCCAAAGTGCAAGCCCCTAATATCACCCTTGATGATCGTGTTTTCCTCCCACCTCCTCCTAAGAATGGTGCCGTGGATTCCCATGAACCTTCATGCTCTGGAGGAGTAGTGTTGGCCTCAGAGGATGGGAAGATTGTGTTAGAGAACACCCTTGATGCACGTTTGGATGTCATTTTTCGTCAGAAATTGCCTGAGGTAAGGAAGCACCTGTTAAGTTGA 1767 0.4686 MPLKSSTAFAFSLTFFLLIANSLTLQTPCYKNPYKQFNLILNPNGTVTRPSKPPESPPALDPTLLVLSKDLTINQSKGTWARIYLPREALNHASKLPLLVFFHGGGFIFLSAASTIFHDFCFNMANDVVAVVASIEYRLAPEHRLPAAYEDAVEALHWIKTSQADDWLRSYVDYSNVFLVGSSAGGNIAYNAGLRAAAGDDLAPEIKGLILVQPFFSGTRRTGSELRLANEPHLALCYNDALWKLSLPVGVNRDHEFCNPTAGNGPARLEMIRRLGWWVLVTGCGGDPLVDRQVQLVRLMQSKGVRVVGHFTPGAYHGIQDSEPLKAKELYGEGGVNCLAKLPGVESIVNMLETGLEKTINCIGCVGKQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYDRKAKQIDVRRKIEYSTQLNASRIKVLQAQDDAINSMKDAARKALLRVSNDKKVYRKLIKDMIVQGLLRLREPSVLIRCREGDRKIVESLLEEVKKEYTEKSKVQAPNITLDDRVFLPPPPKNGAVDSHEPSCSGGVVLASEDGKIVLENTLDARLDVIFRQKLPEVRKHLLS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00404 588 Pfam alpha/beta hydrolase fold 99 319 IPR013094 GO:0016787
Cca04g00404 588 SUPERFAMILY alpha/beta-Hydrolases 41 327 IPR029058 -
Cca04g00404 588 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 99 115 IPR002168 GO:0016787
Cca04g00404 588 Pfam ATP synthase (E/31 kDa) subunit 376 586 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cca04g00404 588 Coils Coil 374 394 - -
Cca04g00404 588 Hamap V-type proton ATPase subunit E [atpE]. 368 588 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cca04g00404 588 PANTHER CARBOXYLESTERASE 120-RELATED 28 333 - -
Cca04g00404 588 SUPERFAMILY V-type ATPase subunit E-like 447 586 - -
Cca04g00404 588 Gene3D - 452 588 IPR038495 -
Cca04g00404 588 PANTHER ARYLACETAMIDE DEACETYLASE 28 333 - -
Cca04g00404 588 Gene3D alpha/beta hydrolase 34 333 IPR029058 -
Cca04g00404 588 Gene3D - 364 422 - -
Cca04g00404 588 Coils Coil 401 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00404 Cca-Chr4 4043231 4048485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00404 366 587 Primary Pumps ATPases(2) AT3G08560 70.270 3.18e-107 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00404 - K02150 gmx:100792597 545.814