Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g00399 | ATGGTTCAGAGAAAGGTTCTAAGCAAGCTTGATATCCAAGCTGATCGTGTCAAATCAGACAAGTCCTTAGCAAACCTAAAGCCATCTTCTCATCACCAAGATGGCACCGCCAGAGGAACCAATAAGATGAAGAAAATGATGAAGCCAAGGTCAATTCAGCTTTCTTATTTGGAGCCTCCTCAATCAAGAAAGCCACCACCTCTTCATGTTTCAACTATTGCAGCATCACCACAACAGCACAAGCATTTGATGAGAAGGTCACCTAACTACATGAAGCCTACCAGCAGTTCAGATGCCAAAAAGGAGCTTTTGCCTGTTAGTCACAGAAATACTCGATCTAGTTCAGATGATGTGAATGCACCAGAGAGGGCTACCTGCTCTTCAACTTTGAAAGACTATAAGTTCCCTGAGTACCTCATGCTTCATCCCGGGGCAACCGAATCTGAGGGAGCTTCTGTCATGAAGGTTTGCCCGTATTCATATTGTTCTCTTAATGACCATGGTCATGCTCCTTTGCCTCCTTTGAAGAGCTTCATGTCAGCAAGGAGACATCTTTTGGAGACTCAACGATGGAAGATGCTCCCCTCTGATACACAAAAAGACTCTGATATTCATGGAAAACCTGCATGTGATGAAACTGATACGGGTAATACAACAATCACTCCATTGGCACAAGAAATTGGTATGGATTTCTTTTTTGAAATCTATGCTAAGGAGAGGGAAGGAGCTCATGAAATGGGAAAATTCAACTCTGTCAAAGATCTTGAGGAACAAGATATCGATTCTGCAAATGAGGAGAATGGCATTGCAGCAGAAGAGGGTGCCATCAAGCAAGTTACTCCAGTTGAAGCAGACAGCAAGGGGAGCTTTCAAAATGCTGAAGATGCAAATGAAAACCACCCACATAGCTGGTTTCACGAAGAAACCTGTACGGGAAGCTATTCCAATGATGCTAGCTATGATGAGGAACACCACGAGAATATTGAATTGGTTGAGTCCAAATCCCAATATAGTGATATGGATTGGGAGGAGGAATACTTCTGTGAATTCAACTATGAAGACGGTACTGATTCTTCAATCTGCTCTATGGAGGAGACTGACCCAAAACTTGAGTCTTTATCAGAGGGTTCACATGATATATCTGAAATGTTGTTAGTTGACATCTTTAGCAACCATTATTCAGACATTCTGGTTGAAGAGGTGAGTCTCCAAGAAGCCGAAGAAGAGAAAAGCACCAGTTTTGAAGCACAACCTCATTGCACTAATTCTGTCATGGTAGGCACAGGTGAAAGCATCGATTTTGTGACTCAAGAAATAGATTATCCGTCCAATGGTATAAGTTTTGAGTATGAACAATCTACTTTGACAAAGGAAGTATTTCAGTATCTGACAAACGCAGAAGATAGCAACAACAGAGAAAATGAAAAACAAGTGAATTATGAGGTCGGTTATGTCTCTATGGTACTCGATGAAGAGACAGTTGAAAACAGTGAAGGCCACAAGACTAGTGAAAGTTGCGAGATTGATAAGAGTTGTGAAGACAAGAGTGCAAGCGTAGAGAATAATGATGATGGCATAATTCACTCGTCTGATGTGCCTGAAGAAAGTACCATTATTGTTCAGAAGCAGAAATTATGGGAGAAAAATCATGTTAGAGGCAGTAGTAAGTTGCAGAGCACAGGTGGTGAAGAGCAGCACATGAGCAAGAATTGGCAATGGGGAACTAAGCGCAAAAGATTGGTCGAAGAGGACGAGGAAATGGGAAAGATCAACCCAAGAAAACCAAATTTCCTGACCTCGGTTGCTGAGCCAGAACCAGAGAAAGTTGAACTGAAGCACCAAATGATAGATGAAAGAAAAAATGCAGAGGAATGGATGCTTGATTTTGCACTAAGACAAACTGTCACGAGACTGGCTCCAGCAGGGAAAAGGAAGCCTTTGCTCGTGCAAGACCTATTCAAGCGTGTAGCTGATGTATGCATAATGCATGCAACTAAGGGTCGTATGGCTTTTACATGGAAACTGAAACACAAGAATGGGATGAGATTTGTTGCCAAAATTTGTTCAGAGTGCTTTCGTGTTTACTTTCTTTTAGTTGTATTTGATGTACTAGAACTTTAG | 2121 | 0.4168 | MVQRKVLSKLDIQADRVKSDKSLANLKPSSHHQDGTARGTNKMKKMMKPRSIQLSYLEPPQSRKPPPLHVSTIAASPQQHKHLMRRSPNYMKPTSSSDAKKELLPVSHRNTRSSSDDVNAPERATCSSTLKDYKFPEYLMLHPGATESEGASVMKVCPYSYCSLNDHGHAPLPPLKSFMSARRHLLETQRWKMLPSDTQKDSDIHGKPACDETDTGNTTITPLAQEIGMDFFFEIYAKEREGAHEMGKFNSVKDLEEQDIDSANEENGIAAEEGAIKQVTPVEADSKGSFQNAEDANENHPHSWFHEETCTGSYSNDASYDEEHHENIELVESKSQYSDMDWEEEYFCEFNYEDGTDSSICSMEETDPKLESLSEGSHDISEMLLVDIFSNHYSDILVEEVSLQEAEEEKSTSFEAQPHCTNSVMVGTGESIDFVTQEIDYPSNGISFEYEQSTLTKEVFQYLTNAEDSNNRENEKQVNYEVGYVSMVLDEETVENSEGHKTSESCEIDKSCEDKSASVENNDDGIIHSSDVPEESTIIVQKQKLWEKNHVRGSSKLQSTGGEEQHMSKNWQWGTKRKRLVEEDEEMGKINPRKPNFLTSVAEPEPEKVELKHQMIDERKNAEEWMLDFALRQTVTRLAPAGKRKPLLVQDLFKRVADVCIMHATKGRMAFTWKLKHKNGMRFVAKICSECFRVYFLLVVFDVLEL | 706 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g00399 | 706 | MobiDBLite | consensus disorder prediction | 495 | 529 | - | - | |
Cca04g00399 | 706 | Pfam | Plant calmodulin-binding domain | 574 | 645 | IPR012417 | GO:0005516 | |
Cca04g00399 | 706 | PANTHER | PLANT CALMODULIN-BINDING-LIKE PROTEIN | 1 | 116 | - | - | |
Cca04g00399 | 706 | MobiDBLite | consensus disorder prediction | 553 | 574 | - | - | |
Cca04g00399 | 706 | MobiDBLite | consensus disorder prediction | 553 | 569 | - | - | |
Cca04g00399 | 706 | MobiDBLite | consensus disorder prediction | 108 | 123 | - | - | |
Cca04g00399 | 706 | MobiDBLite | consensus disorder prediction | 196 | 210 | - | - | |
Cca04g00399 | 706 | MobiDBLite | consensus disorder prediction | 196 | 217 | - | - | |
Cca04g00399 | 706 | MobiDBLite | consensus disorder prediction | 495 | 521 | - | - | |
Cca04g00399 | 706 | PANTHER | CALMODULIN-BINDING PROTEIN-RELATED | 1 | 116 | IPR044681 | GO:0005516 | |
Cca04g00399 | 706 | PANTHER | CALMODULIN-BINDING PROTEIN-RELATED | 116 | 282 | IPR044681 | GO:0005516 | |
Cca04g00399 | 706 | PANTHER | PLANT CALMODULIN-BINDING-LIKE PROTEIN | 116 | 282 | - | - | |
Cca04g00399 | 706 | PANTHER | PLANT CALMODULIN-BINDING-LIKE PROTEIN | 282 | 658 | - | - | |
Cca04g00399 | 706 | MobiDBLite | consensus disorder prediction | 15 | 123 | - | - | |
Cca04g00399 | 706 | PANTHER | CALMODULIN-BINDING PROTEIN-RELATED | 282 | 658 | IPR044681 | GO:0005516 | |
Cca04g00399 | 706 | SMART | CaM_binding_2 | 547 | 658 | IPR012417 | GO:0005516 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g00399 | Cca-Chr4 | 4004346 | 4006930 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g00399 | 563 | 656 | Calmodulin-binding Proteins | AT2G38800 | 46.809 | 2.99e-19 | 90.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g00399 | - | - | ccaj:109798360 | 1234.94 |