Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00365 ATGGCCTTAGCACCAGCCTCTCTCCCGAAACCCTCCCTCCTGCACACCCACCCCTTCGCGAATAGCAATAATAGCCTCCCAATCGTGCTCCCACGCGCGGCCTTGAAACCCTGGTCCTTGGTGGTATCCTCGAAAAAGCGGATTGGCGATGTGGTGGTAAGCGAGTGGATGGAGGATGAGAAGCCGCGGGAGGAGTGCGGCGTGGTGGGAATCTACGGGGACCCGGAGGCGTCGCGGCTGTGCTACCTGGCCCTGCACGCGCTGCAGCACCGGGGGCAGGAGGGGGCGGGGATCGTGACGGTCCACAACAACGTGCTGCAGTCGATAACGGGGGTGGGGCTGGTCTCCGACGTGTTTAGCGAGTCAAAGCTGGACCAGCTCCCCGGCAGCCTGGCCATCGGCCACGTCCGCTACTCCACGGCGGGGCAGTCCATGCTGAAGAACGTGCAGCCCTTCGTGGCCGGCTACCGCTTCGGCTCCGTCGGCGTCGCCCACAACGGGAACCTCGTCAACTACCGCACCCTCCGCTCCCACCTCGAGGAGTCCGGctccatcttcaacaccacctccgacaccgaggtcgtcctccacctcatcgccacctccaAGCACCGCCCCTTCATCCTCCGCATCGTCGACGCCTGCGAGAAGATCCAGGGCGCCTACTCCATCGTCTTCGTCACCGAGGACAAGCTCGTCGCCGTCCGCGACCCCTTCGGCTTCCGCCCCCTCGTCATGGGCCGCCGCAGCAACGGCGCCGTCGTCTTCGCCTCCGAGACCTGCGCCCTCGACCTCATTGAAGCGACCTACGAGAGAGAAGTCTTCCCCGGCGAGGTTCTCGTCGTCGACAAAAACGGTATTCAATCCCTCTGCCTCATGACCCACCCCCAACCCAAGCAATGCATCTTCGAACACATTTACTTCGCGCTTCCCAATTCCGTTGTCTTCGGTAGGTCTGTCTACGAGTCTCGCAGACAATTTGGGGAAATTTTAGCCACCGAAAGCCCCGTTGATTGTGACGTTGTCATCGCTGTTCCTGATTCCGGCGTCGTCGCCGCCCTCGGTTACGCCGCTAAGGCTGGGGTTCCCTTTCAGCAGGGTTTGATTAGGTCACACTACGTCGGCAGAACCTTCATTGAGCCCTCTCAGAAAATTCGCGACTTTGGCGTCAAACTGAAGCTCTCACCCGTCCGTGCTGTTCTCGAAGGGAAAAGGGTCGTGGTTGTGGATGATTCCATTGTGCGAGGAACTACCTCGTCCAAAATTGTTCGGTTGCTGAAGGAGGCTGGTGCTAAGGAAGTTCACATGAGGATTGCAAGTCCTCCAATTATAGGGTCTTGTTACTATGGTGTGGACACTCCCAGCTCCGAGGAATTGATTTCCAATAGGATGAGTGTGGAGGAGATAAGGGACTTCATTGGGTCTGATTCTCTTGCGTTTTTGCCCTTTGATAGCTTGAAGAGGTTGTTGGGGAATGAGTCTCCCAATTTCTGTTATGCATGTTTCTCTGGGAATTACCCTGTGGAGCCCAGGGAGCTTAAGGTGAAGAGGGTTGGGGATTTTGTGGATGATGGCTTGAATGGGAGCTTGGAGTCTATTGATGGGGGTTGGGTTCAAGCCAACAGAAATCAAATCAAGTCTTAG 1644 0.5554 MALAPASLPKPSLLHTHPFANSNNSLPIVLPRAALKPWSLVVSSKKRIGDVVVSEWMEDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVHNNVLQSITGVGLVSDVFSESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRSHLEESGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKIQGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVLVVDKNGIQSLCLMTHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPFDSLKRLLGNESPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANRNQIKS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00365 547 SUPERFAMILY PRTase-like 301 512 IPR029057 -
Cca04g00365 547 TIGRFAM purF: amidophosphoribosyltransferase 66 507 IPR005854 GO:0004044|GO:0009113
Cca04g00365 547 Hamap Amidophosphoribosyltransferase [purF]. 65 506 IPR005854 GO:0004044|GO:0009113
Cca04g00365 547 CDD PRTases_typeI 328 439 IPR000836 -
Cca04g00365 547 CDD GPATase_N 66 316 IPR035584 -
Cca04g00365 547 Pfam Glutamine amidotransferase domain 144 263 IPR017932 -
Cca04g00365 547 Gene3D - 325 489 IPR029057 -
Cca04g00365 547 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 31 538 - -
Cca04g00365 547 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 66 285 IPR017932 -
Cca04g00365 547 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 31 538 - -
Cca04g00365 547 Pfam Phosphoribosyl transferase domain 340 435 IPR000836 -
Cca04g00365 547 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 66 289 IPR029055 -
Cca04g00365 547 PIRSF Pur1 62 520 IPR005854 GO:0004044|GO:0009113
Cca04g00365 547 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 66 507 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00365 Cca-Chr4 3679717 3682048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00365 58 539 PRT Gene Family AT2G16570 85.744 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00365 K00764 - gmx:100791919 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00365 04 3679717 3682048 Cca04g00365 04 3679717 3682048 ECH