Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00364 ATGTTGGCGTCGACGGGGAACTGCAGCAAAATCCGGCGCATTGTGCGGGTGCGGCAGATGCTGATGCGGTGGCGGAGGAAGGCGGCGAGGACGGACGTGCCGGCGGGACACGTGGCGGTGTGCGTGGGGCCGAGCAGGAGGAGGTTCATCGTGCCGGCGACGCACCTCAACCACCCCATATTCAAGACGCTCCTGGTGGAGGCGGAGGAGGAGTACGGCTTCTGCAACCACGGTCCTCTCGCTATTCCCTGCGACGAGTCGCTCTTCGAAGAGCTTCTCAGGGTTCTCGCGCGACCCGTCCCAGCCTTCAACACGCTCGAGGATTTTCAGAGACGCTGCCACGTGGACGTATCCACTGCCTTCGACTTTGAATCGCGGCCGTTGCTTCGTGACGAGCCCATTTGCTGA 408 0.6299 MLASTGNCSKIRRIVRVRQMLMRWRRKAARTDVPAGHVAVCVGPSRRRFIVPATHLNHPIFKTLLVEAEEEYGFCNHGPLAIPCDESLFEELLRVLARPVPAFNTLEDFQRRCHVDVSTAFDFESRPLLRDEPIC 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00364 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 130 IPR003676 GO:0009733
Cca04g00364 135 Pfam Auxin responsive protein 18 96 IPR003676 GO:0009733
Cca04g00364 135 PANTHER SMALL AUXIN-UP RNA-RELATED 6 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00364 Cca-Chr4 3657718 3658612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00364 6 129 Calmodulin-binding Proteins AT4G34750 51.773 1.59e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00364 K14488 - gmx:100795345 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00364 04 3657718 3658612 Cca04g00364 04 3657718 3658612 ECH