Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00342 ATGGGAAAAGCAACGTTGAATCCCCTACTGGCTGTCTTCACAGTCGTTATCCTTTCCACTGTTTACGCCGATGAAGCATCGAAAACATTCATCTTCCGCGTGGATTCCCAAGCCAAGCCCTCCGTCTTCCCCACGCACCTCCACTGGTACACCTCAGAGTTCACCCAACAAACAACCATCCTCCACGTCTACGACACCGTTTTCCATGGCTTCTCCGCGCGCCTCACGCGCCAACAAGCCCACTCCCTAGGCCAACACCCCTCCGTGCTCGCCGTCTTCGAGGACACCCGCCGCCACCTCCACACCACGCGCTCCCCACAGTTCCTCGGCCTCCGCAACCAGCGTGGCCTCTGGTCCGACTCCGACTACGGCTCCGACGTCATCATTGCTGTCTTCGACACCGGCGTCTGGCCCGAGCGCCGCAGCTTCTCCGATTTGAACCTCGGACCCATTCCCCGCCGCTGGAAAGGCGCATGCGAGACGGGAGTCAGATTCTCCACCAAGAACTGCAACCGCAAGCTCATCGGCGCAAGGTTCTTCTCCAAAGGCCACGAGGCCGGCGCCGCCGCCGGCCCTCTCAACCCCATCAACGACACCGTTGAATTCCGCTCCCCTCGCGACGCCGATGGCCACGGCACCCACACCGCCTCCACCGCCGCCGGCCGCTACGCCTTCCAGGCCAGCATGTCCGGCTACGCCGCCGGAATCGCCAAAGGCGTCGCTCCCAAAGCGCGGTTGGCGGTGTACAAGGTATGCTGGAAAAACTCCGGCTGCTTCGACTCCGACATCCTCGCCGCCTTCGACGCCGCTGTCAACGACGGCGTAGACGTGATTTCCATATCCATCGGTGGAGGCGATGGAATCGCCTCGCCTTACTATCTGGACCCCATCGCAATCGGGTCCTACGGCGCGGTTGCCAGAGGAGTGTTCGTATCTTCTTCCGCCGGCAACGACGGGCCAAGCGGAATGTCAGTGACGAACCTGGCGCCATGGTTGACGACGGTAGGAGCAGGCACGATTGATCGTGACTTCCCGGCGCAGGTGATTCTGGGCGACGGTGGGAGACTGTCGGGCGTGTCGCTGTACGCGGGCGCGGCGTTGAAGGGGAAAATGTATGAAGTTGTATACCCTGGGAAATCGGGAATACTAGGGGATTCCCTATGCATGGAGAATTCTCTAGATCCGAAGATGGTAAAGGGTAAGATAGTAGTATGCGACAGAGGAAGTTCCCCGAGGGTTGCCAAGGGGCTGGTGGTGAGGAAGGCCGGGGGCGTGGGAATGATTCTGGCGAACGGAATCTCCAACGGCGAAGGCCTCGTCGGGGACGCGCATCTTCTCCCGGCGTGTGCTGTGGGTGCCAACGAAGGGGATGCCATCAAGAAATACATTTCCTCTTCACGGAACCCAACGGCTACCCTCCATTTCAAAGGCACTATTTTGGGAATCAAACCGGCGCCGGTTCTCGCTTCTTTCTCTGCCAGAGGACCCAACGGTTTAAACCCTGAGATTCTCAAACCGGATTTGATTGCTCCCGGTGTCAACATCCTCGCTGCTTGGACCGACGCTGTCGGCCCCACCGGTTTGGATTCCGACACCAGGAGAACCGAATTTAACATTTTGTCCGGCACTTCCATGGCTTGCCCTCACGTGAGTGGCGCCGCGGCCTTGCTCAAATCCGCACACCCTGATTGGAGCCCCGCCGCCATAAGATCCGCCATGATGACCACCGCCACCGTCCTTGACAATAAAAACCGGATCTTGACCGATGAGGCCACCGGAAACAATTCCACTCCTTACGATTTCGGCGCTGGACATCTGAACCTAGGACGCGCCATGGATCCTGGCTTGGTGTACGATATCACCAACAATGATTATGTTAATTTCCTCTGCGGTATTGGTTACGGGCCCAAGGTTATTCAGGTTATCACCCACGCGCCTGCGAGTTGTCCCGCGAAAAGGCCTTCCCCGGAGAATCTGAATTACCCGTCTTTCGTGGCTATGTTTCCGGTTTCTTCCAAGGGGGCGGTGTCCAAGATGTTCATACGGAGCGTCACCAATGTGGGGCCCGCCAACGCGGTTTACCGCGTCAACGTGGAGGCCCCGAGTGGGGTGACCGTGACAGTGAAGCCCTCGCGGCTGGTTTTCTCTGAGGCGGTGAAGAAGCGGAGCTATGTGATGACGGTGGCGGCGGACACCCGAAGTCTGAAGATGGGTCAGTCCGGGGCGTTGTTCGGGTCGGTGACGTGGACGGATGGGACCCACGTGGTTCGGAGCCCCGTTGTCGTTACTCAATTAGAACCGATTTAG 2307 0.5899 MGKATLNPLLAVFTVVILSTVYADEASKTFIFRVDSQAKPSVFPTHLHWYTSEFTQQTTILHVYDTVFHGFSARLTRQQAHSLGQHPSVLAVFEDTRRHLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIAVFDTGVWPERRSFSDLNLGPIPRRWKGACETGVRFSTKNCNRKLIGARFFSKGHEAGAAAGPLNPINDTVEFRSPRDADGHGTHTASTAAGRYAFQASMSGYAAGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVARGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPAQVILGDGGRLSGVSLYAGAALKGKMYEVVYPGKSGILGDSLCMENSLDPKMVKGKIVVCDRGSSPRVAKGLVVRKAGGVGMILANGISNGEGLVGDAHLLPACAVGANEGDAIKKYISSSRNPTATLHFKGTILGIKPAPVLASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDSDTRRTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATVLDNKNRILTDEATGNNSTPYDFGAGHLNLGRAMDPGLVYDITNNDYVNFLCGIGYGPKVIQVITHAPASCPAKRPSPENLNYPSFVAMFPVSSKGAVSKMFIRSVTNVGPANAVYRVNVEAPSGVTVTVKPSRLVFSEAVKKRSYVMTVAADTRSLKMGQSGALFGSVTWTDGTHVVRSPVVVTQLEPI 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00342 768 CDD PA_subtilisin_like 348 473 - -
Cca04g00342 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 101 IPR037045 -
Cca04g00342 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Cca04g00342 768 Gene3D Peptidase S8/S53 domain 126 625 IPR036852 GO:0004252|GO:0006508
Cca04g00342 768 SUPERFAMILY Subtilisin-like 100 616 IPR036852 GO:0004252|GO:0006508
Cca04g00342 768 Pfam Fibronectin type-III domain 658 762 IPR041469 -
Cca04g00342 768 ProSiteProfiles Serine proteases, subtilase domain profile. 97 612 - -
Cca04g00342 768 Pfam PA domain 372 459 IPR003137 -
Cca04g00342 768 Pfam Subtilase family 124 588 IPR000209 GO:0006508|GO:0008236
Cca04g00342 768 SUPERFAMILY PA domain 372 466 IPR046450 -
Cca04g00342 768 PANTHER XYLEM SERINE PROTEINASE 1 19 762 - -
Cca04g00342 768 PRINTS Subtilisin serine protease family (S8) signature 124 143 IPR015500 -
Cca04g00342 768 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Cca04g00342 768 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Cca04g00342 768 CDD Peptidases_S8_3 99 578 IPR034197 -
Cca04g00342 768 SUPERFAMILY Protease propeptides/inhibitors 29 99 - -
Cca04g00342 768 Gene3D - 341 480 - -
Cca04g00342 768 Pfam Peptidase inhibitor I9 36 101 IPR010259 -
Cca04g00342 768 Gene3D - 629 765 - -
Cca04g00342 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 762 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00342 Cca-Chr4 3325965 3328687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00342 9 768 Subtilisin-like Serine Gene Family AT4G34980 73.885 0.0 1185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00342 - - gmx:100817537 1387.86