Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00327 ATGGCGGCTACTGTGTCTGCGTGGTCAAAGCCCGGCGCCTGGGCCCTCGATTCCGAGGAACACGAAGCCGAACTCCTTCAACAGAACCCCAACGACACCAAACCCCTCGCCGACTTCCCCTCCCTCGCCGTCGCCGCCGCCACCAAGCCCAAAAAGAAGAAGGCCCAAACCTACTCCCTCGCCGAATGGGGTTCTAGGGTTTCCGACGAGCCTCGCCGAAACGGCTCCTTCGGCTCTAGGGATTCCAATCGCGAGTTGCCCCCTTCACGCGCCGACGAAACCGACAATTGGGCCGCCGCCAAGAAACCCTCCGGGGGGTTTGAGAGGAGGGAGAGGGAAAAGGGAGGGTTTTTCGATTCGCAGTCACGCGCCGACGAATCTGACAGCTGGGTTTCGAACAAGAGCTTCGTGCCGTCGGAGGGGCGGCGATTTAACGGTGGAGGAGGGTTCGAGAGAGAGAGGAGGGTCGTAGGGTTCGGTTCCAGCGGCGGCGCGGATTCCGACAACTGGAACAGGAAGAAGGGTGAGTCCAACGTTGTGAGCGAGAGCGGTGGTGTTGCTGGTACGAGGCCGAGGCTTAATTTGCAACCTAGGACAATGTCGGTGAGCAATGAAGGGCAAGATGGGAATGTGGGAAAACCCAAAGGGGTTAATCCCTTTGGAGAGGCACGGCCTAGGGAACAGGTTTTGGCGGAGAAAGGGCAAGATTGGAAGAAGATTGATGAACAGCTTGAGAGCATGAAGATTAAGGAGACAACCGGTGATGGGTTTGGGAAGAGGGGTTTTGGTTCTGCAAATGGAGCACGTGGTGCTACTTTGCCTGAAAGTCGCACTGAGAGGAGTTGGAGGAAGCCCCAATCTGATGATGAACGTCCTAAAAGTGCTGAGAAAGTGGAAGAACACGTTGAAGAAAATTGA 918 0.5654 MAATVSAWSKPGAWALDSEEHEAELLQQNPNDTKPLADFPSLAVAAATKPKKKKAQTYSLAEWGSRVSDEPRRNGSFGSRDSNRELPPSRADETDNWAAAKKPSGGFERREREKGGFFDSQSRADESDSWVSNKSFVPSEGRRFNGGGGFERERRVVGFGSSGGADSDNWNRKKGESNVVSESGGVAGTRPRLNLQPRTMSVSNEGQDGNVGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESMKIKETTGDGFGKRGFGSANGARGATLPESRTERSWRKPQSDDERPKSAEKVEEHVEEN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00327 305 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 62 298 IPR010433 GO:0003743
Cca04g00327 305 MobiDBLite consensus disorder prediction 104 121 - -
Cca04g00327 305 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 62 - -
Cca04g00327 305 MobiDBLite consensus disorder prediction 226 255 - -
Cca04g00327 305 MobiDBLite consensus disorder prediction 66 97 - -
Cca04g00327 305 MobiDBLite consensus disorder prediction 122 139 - -
Cca04g00327 305 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 62 IPR010433 GO:0003743
Cca04g00327 305 MobiDBLite consensus disorder prediction 194 208 - -
Cca04g00327 305 MobiDBLite consensus disorder prediction 276 305 - -
Cca04g00327 305 MobiDBLite consensus disorder prediction 1 305 - -
Cca04g00327 305 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 62 298 - -
Cca04g00327 305 Pfam Plant specific eukaryotic initiation factor 4B 75 254 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00327 Cca-Chr4 3177967 3180442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00327 72 284 Eukaryotic Initiation Factors Gene Family AT4G38710 50.607 4.37e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00327 - - pvu:PHAVU_011G033300g 441.81