Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00301 ATGCTTCTGGACAAGAATGCTATTCAGGAAACTCATTATGAGGTTCTCAATGTCAAGGAAGATGCAAATTATGAAGAAATTCGCACAAGTTACCGTAGTGCTGTACTCAGTTTACATCCTGATAAGCTATTGAAGACGTCCGAGACATCCAGCAGTAATCAAACAGCTGGGGAGAGATTTCTCAGAGTACAGAAGGCATGGGAAATTCTGAGTAATTCAAGCTCCCGTTCATTTTACGATAATGAGCTGCGAAGTTCGAGGCAGGATGTCTTGGCTGCCGAAGTTGCTGATGTTGCTGAAGATTTGAGCCTACAGGATATGATGATTGAAGATGCTGGAGAAGCATTGGAACTGTTTTATCAATGCCGATGTGGAGATTACTTCTCTGTAGACTCGTTGGAATTGAAGAACATGGGATATTCCTTGTTGAGGGAGGGAAGTAGGATATCTATACTGAATGTTGACACTTTACCAGGATCAGTGATTCTTCCATGTGGATCTTGTTCGTTAAAAGCTCGTCTGCTAATCAATGTGGATGACAATTGA 546 0.4176 MLLDKNAIQETHYEVLNVKEDANYEEIRTSYRSAVLSLHPDKLLKTSETSSSNQTAGERFLRVQKAWEILSNSSSRSFYDNELRSSRQDVLAAEVADVAEDLSLQDMMIEDAGEALELFYQCRCGDYFSVDSLELKNMGYSLLREGSRISILNVDTLPGSVILPCGSCSLKARLLINVDDN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00301 181 SUPERFAMILY Chaperone J-domain 10 83 IPR036869 -
Cca04g00301 181 Pfam DnaJ domain 11 80 IPR001623 -
Cca04g00301 181 SMART dnaj_3 10 75 IPR001623 -
Cca04g00301 181 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 98 177 IPR007872 -
Cca04g00301 181 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 1 179 - -
Cca04g00301 181 Pfam CSL zinc finger 102 175 IPR007872 -
Cca04g00301 181 Gene3D DPH Zinc finger 96 181 IPR036671 -
Cca04g00301 181 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Cca04g00301 181 CDD DnaJ 11 72 IPR001623 -
Cca04g00301 181 Gene3D DnaJ domain 3 95 IPR036869 -
Cca04g00301 181 SUPERFAMILY CSL zinc finger 99 180 IPR036671 -
Cca04g00301 181 PANTHER DPH3 HOMOLOG-RELATED 1 179 IPR044248 GO:0017183|GO:0046872
Cca04g00301 181 PRINTS DnaJ domain signature 13 31 IPR001623 -
Cca04g00301 181 PRINTS DnaJ domain signature 31 46 IPR001623 -
Cca04g00301 181 PRINTS DnaJ domain signature 55 75 IPR001623 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00301 12 94 C2H2 Transcription Factor Family AT1G74250 39.759 1.53e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00301 K17867 - gmx:100814856 309.686