Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00269 ATGGCTTTGTTTTCAGTTAAGTTGAATTTTGTTGTTCATCTTATGCTTCTCGTCTCTTTCACCAAACAAGCCTTAGGTGTGTCAGTGAGCAGCAAGGTATTGGCCGAACAAGAAGCAGACAGAGTGTATGAATTACCTGGTCAGCCTAAGGTCAAGTTCAAACAATATGCTGGTTACATCACTGTTAATCAAACTCATGGCAGAGCACTCTTCTATTGGTTCTTTGAAGCCACACACAAATCGCAACAACAACCTCTTCTCCTTTGGCTCAATGGAGGCCCTGGCTGTTCTTCAATTGGTTATGGAGAAGCAGAGGAGCTAGGACCCTTCTTTCCCCAGAACAGCAGCCAACCAAAGCTAAAGTTGAACCCTTATTCTTGGAATAAAGCTGCCAATCTTTTGTTTTTGGAATCCCCTGTGGGAGTGGGATTCTCCTACACCAACACCAGCAGTGATATCAGTGAGCTTGGTGACACCATTACTGCTAAAGATTCACACACCTTTCTCATCAACTGGTTTAGGAGATTTCCGCAATTTAGATCACACAAGTTCTACATTGCAGGTGAAAGCTATGCAGGACACTACGTTCCGCAACTTTCTGAGCTCATTTTCGATAATAATCGCAATCCTGCCGAGAAAGACTACATTAACTTCAAAGGATTCATGATTGGAAATGCAGCATTGGACGATGAAACAGATTCAAAGGGTATGGTAGATTATGCATGGGATCATGCTGTCATATCAGATGGATTATACCATAACATTACTACCAAATGCAATTTTAGTCTTCCAAATCAAACAGATGAATGCTCAGTGGAACTCAACAAGTACTTCGCTGTGTATAGGATTATTGACATGTATAGCTTGTACGCTCCCAAGTGTTTCAGCAACAACAGCAATACCAGAAAGGAAACCACTGTTGTCAGAAGCACAACCCCTCAAACTTTTTCCAAAATTGATGGGTGGCATAGAAAACCAGCTGGTGGATATGATCCTTGTGCATCCGATTATACTGAAGTGTACCTAAACAGGCCAGAAGTTCAAAAGGCATTACATGCCAATGTCACAAAAATTCCCTATCCATGGACTCATTGCAGCGATAATATTACATTTTGGAGTGACGCACCACATTCCATGCTTCCTGTCATAAAGAAGCTTATTGCTGGTGGTCTTCGCATTTGGGTTTACAGTGGAGATACCGATGGAAGAATTCCCGTAACTTCAACAAGATACACTCTTAGAAAGTTGGGACTTGGGATTGTTGAAGATTGGACTCCATGGTATACCAGCAACCAGGTGGGAGGATGGACCATTGTTTACGACGGGCTTACCTTTGTTACCATCAGGGGTGCTGGTCATCAAGTTCCTACTTTCGCACCCAAACAAGCTCTGCAGGCCAGTGCAAAGGAAGTGAGTGGGAAGAAGTTAAGGGAAATGGGTTTGTGTTCAGTTGTTTTGAATTTTGTTGTACATGTTGTGCTTCTCATCTCTTTCACCAAACAAGCTTTAGGTGTGGCACTAAACAAAGAGGTATTGGCAGAGCAAGAAGCTGACAGAGTGTATGAATTACCGGGTCAGCCTGAGGTGAAGTTTAAACAATATGCTGGTTATATCACTGTCAATGAATCTCATGGCAGAGCACTGTTCTATTGGTTTTTTGAGGCCACTCACAAACCACAACATAAGCCTGTTCTCTTATGGCTCAATGGAGGCCCTGGCTGTTCCTCAATTGGTGCTGGAGAAACAGAGGAGCTGGGACCCTTCTTTCCCCAAAACAGCTACCGACCAAAGCTAAAGTTGAACCCTTATTCTTGGAACAATGCTGCCAATCTTTTGTTTTTGGAATCCCCTGTTGGAGTGGGATTCTCCTACACCAACACCAGCAGTGACCTGGATGAGCTTGGTGACACCATTACGGCTAAAGATTCACATACCTTTATCGTCAAGTGGTTTAAGAGATTTCCACAATTTAAATCCCACAAGTTCTTCATCTCTGGTGAAAGCTATGCAGGGCACTATGTTCCGCAACTTGCTGAGCTCATTTTCGATAATAATCGGAATCCTGCCAAGAAAGACTTCATTAACTTCAAAGGATTCATAATTGGAAATGCAGCATTGGATGACGAAACAGATCAACAGGGTTTGGTAGATTACGCGTGGAGTCACGCAGTGATATCTGATGGATTGTACGATAACATTACAACCAAATGCAATTTCAGACATGAAAATCTAACAGATGATTGCGATGTAGAAATGGGTAAGCTCTTCGATGCGTATGAAAATATTGACATATATAGCTTGTACACTCCTGCTTGTTACAGAAACTATAGCAGTACCAGAAAGCAATCCCCTATAGTTAGAGGCAAACTCCCTCTAGCTTTTTCTAAAATTGATGGATGGCGTAGAAAACCAGCAGGTGGATATGATCCTTGTTCATCCGATTATACTGAAGCATACCTTAACACGCCTGAAGTCCAAAAGGCATTGCATGCCAATGTTACCAAAATTTCCTATCCATGGTCTCAGTGCAGCGATAATATTGGAAGTTGGAGAGACTCGCCACATTCCATTCTTCCTGTCATAAAGAAGCTTATTGCTGGTGGTCTTCGCATTTGGGTTTACAGTGGAGATACCGATGGAAGAGTTCCCGTGACATCAACAAGGTACGCTCTTAAAAAGTTGGGGCTTGAAATTGTTCAAGATTGGACTCCCTGGTATACCAGCACACAGGTGGGAGGATGGACCGTTGTTTACAAAGGACTTACTTTTGTGACAATAAGAGGTGCTGGTCATGAAGTTCCTAGGTTCACTCCCAAGCCAGCTCTGCAGTTGGTTCGTCACTTCCTACAGAATAGGAATATACCATCTCGACCAATCTAA 2880 0.4278 MALFSVKLNFVVHLMLLVSFTKQALGVSVSSKVLAEQEADRVYELPGQPKVKFKQYAGYITVNQTHGRALFYWFFEATHKSQQQPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSSDISELGDTITAKDSHTFLINWFRRFPQFRSHKFYIAGESYAGHYVPQLSELIFDNNRNPAEKDYINFKGFMIGNAALDDETDSKGMVDYAWDHAVISDGLYHNITTKCNFSLPNQTDECSVELNKYFAVYRIIDMYSLYAPKCFSNNSNTRKETTVVRSTTPQTFSKIDGWHRKPAGGYDPCASDYTEVYLNRPEVQKALHANVTKIPYPWTHCSDNITFWSDAPHSMLPVIKKLIAGGLRIWVYSGDTDGRIPVTSTRYTLRKLGLGIVEDWTPWYTSNQVGGWTIVYDGLTFVTIRGAGHQVPTFAPKQALQASAKEVSGKKLREMGLCSVVLNFVVHVVLLISFTKQALGVALNKEVLAEQEADRVYELPGQPEVKFKQYAGYITVNESHGRALFYWFFEATHKPQHKPVLLWLNGGPGCSSIGAGETEELGPFFPQNSYRPKLKLNPYSWNNAANLLFLESPVGVGFSYTNTSSDLDELGDTITAKDSHTFIVKWFKRFPQFKSHKFFISGESYAGHYVPQLAELIFDNNRNPAKKDFINFKGFIIGNAALDDETDQQGLVDYAWSHAVISDGLYDNITTKCNFRHENLTDDCDVEMGKLFDAYENIDIYSLYTPACYRNYSSTRKQSPIVRGKLPLAFSKIDGWRRKPAGGYDPCSSDYTEAYLNTPEVQKALHANVTKISYPWSQCSDNIGSWRDSPHSILPVIKKLIAGGLRIWVYSGDTDGRVPVTSTRYALKKLGLEIVQDWTPWYTSTQVGGWTVVYKGLTFVTIRGAGHEVPRFTPKPALQLVRHFLQNRNIPSRPI 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00269 959 ProSitePatterns Serine carboxypeptidases, serine active site. 664 671 IPR018202 GO:0004185
Cca04g00269 959 Gene3D - 333 370 - -
Cca04g00269 959 Gene3D - 811 847 - -
Cca04g00269 959 Gene3D alpha/beta hydrolase 514 774 IPR029058 -
Cca04g00269 959 Gene3D alpha/beta hydrolase 36 296 IPR029058 -
Cca04g00269 959 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Cca04g00269 959 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Cca04g00269 959 PRINTS Carboxypeptidase C serine protease (S10) family signature 443 456 IPR001563 GO:0004185|GO:0006508
Cca04g00269 959 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Cca04g00269 959 Pfam Serine carboxypeptidase 47 466 IPR001563 GO:0004185|GO:0006508
Cca04g00269 959 Pfam Serine carboxypeptidase 525 951 IPR001563 GO:0004185|GO:0006508
Cca04g00269 959 Gene3D - 379 473 - -
Cca04g00269 959 Gene3D - 857 950 - -
Cca04g00269 959 SUPERFAMILY alpha/beta-Hydrolases 515 955 IPR029058 -
Cca04g00269 959 SUPERFAMILY alpha/beta-Hydrolases 37 472 IPR029058 -
Cca04g00269 959 ProSitePatterns Serine carboxypeptidases, histidine active site. 443 460 IPR033124 GO:0004185
Cca04g00269 959 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 496 958 IPR001563 GO:0004185|GO:0006508
Cca04g00269 959 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 467 IPR001563 GO:0004185|GO:0006508
Cca04g00269 959 ProSitePatterns Serine carboxypeptidases, serine active site. 186 193 IPR018202 GO:0004185
Cca04g00269 959 PANTHER CARBOXYPEPTIDASE 496 958 - -
Cca04g00269 959 PANTHER CARBOXYPEPTIDASE 21 467 - -
Cca04g00269 959 ProSitePatterns Serine carboxypeptidases, histidine active site. 921 938 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00269 Cca-Chr4 2580558 2598585 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00269 819 931 Calmodulin-binding Proteins AT2G22960 33.333 1.12e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00269 K16297 - gmx:100781503 833.172