Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00240 ATGATCAACGCAAAAAGGCTTATTGAAATGGCAAGAAAGTGGCAGAAAATGGCAGCTAGAAAGCGCAAGAGAATTTCATACTCGAGGCGTCAAATTGATATGCATTCTGCAACAACAAACAAGGGTCACTTCGTGGTTTACAGCATCGACCACAAACGATTCGAGGTTCCTCTAAAGTACCTTAGCAAGAAGGTGTTTAAGGAGCTACTCAAGTGGTCCGAAGAGGAATTTGGGTTATCATCTAATGGACCTATTACGTTACCTTGTGATAGCCTCTTCTTGGACTACGTAATTTCTTTGGTTCGTGAACGCATTTCCGAAGATGTGGAAAAGGCTTTGATCACTTCATTGGTTGCATGTCACCACGAGGCATCATCACCATCGTCTTTTAATGGTCTTGGGCAGGGTCGTAACGGCCAAATGATTATTTTTGGCTTTTGA 441 0.4263 MINAKRLIEMARKWQKMAARKRKRISYSRRQIDMHSATTNKGHFVVYSIDHKRFEVPLKYLSKKVFKELLKWSEEEFGLSSNGPITLPCDSLFLDYVISLVRERISEDVEKALITSLVACHHEASSPSSFNGLGQGRNGQMIIFGF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00240 146 Pfam Auxin responsive protein 12 100 IPR003676 GO:0009733
Cca04g00240 146 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 146 - -
Cca04g00240 146 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 146 IPR003676 GO:0009733
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00240 6 109 Calmodulin-binding Proteins AT3G43120 26.119 4.69e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00240 - - ccaj:109798531 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00240 04 2342159 2342893 Cca04g00240 04 2342159 2342893 ECH