Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00184 ATGGAGTTTGTAAGCTGTATACTCCTCCTTGTGTTAGCTTTAGCAACGTTTGCACAAACTCTGCAATGGGTGGGTTCAAGAAGAAGGTCGAAACTGCCACCAGGACCTTACCCTCTTCCCATGATTGGAAACCTTGTTCAACTGGGCACAAAGCCTCACCAATCCCTGGCCCATCTCGCTCAAATTCACGGCCCAATCATGAGCATCAAACTGGGCCAAGTAACCACCATAGTCGTCTCTTCCCCTCACATGGCCAAAGAGGTTCTCCAAACCCATGACCGCTCCTTCTCAGACAAAGCAGTTCCACAAGCCGTGCATGTTCACAACCACCACAACCACAGTGTCGCCTTCTTACCCGTTTCACCTCTCTGGCGTCACCTAAGGAAAATTTCCAACCAAAACTTATTCTCCAACAACACTTTGGACTCAAACCAAAACCTCAGACGCAACAAACTGCATGATCTCATCAATGATATCCACCAAAGTAGCCTCCTTGGTGAAGCTGTGGATATTGGAAAAGCGGTTTTCAAGACTTCTATCAACTTGTTATCCAACACTATGTTTTCTTTGGATTTGGTCCACTCTGCAGGTTCTGTTGGAGATTTCAAGGACTTGGTGGTCAACATCATGGAAGAGTGTGGGAGACCAAACCTTGCTGATTTCTTCCCTGTGCTCAAAATAATTGACCCTCAAGGCATCAGGAGTAGAAACAGTGTTTATGCTGGCAAGATCATTCACACCTTTCGAGATTTGATTCATCAGAGGCTGAAGCTAAGGGAAGACCAGGGCCTTGACTCAAACAATGACATGTTGAATACTTTGCTCAACAGCCAAGAGATGAACCAAACCATGATTCAACATTTAGCTCTGACTTTGTTTGTTGCGGGAACGGATACAATTACATCTACATTAGAATGGGCAATGGCAGAATTGGTGCAaaatgaaaaggcaatgtcaaaggcaaaacaagagctagaggaaatcattggcaaaggaaaaCCGGTTGAGGAATCAGATATTGCTAAGCTTCCTTATTTGCAAGCAGTGATAAAAGAGACCTTCCGGTTGCACCCTTCGGTCCCATTTTTGGTCCCTCGTAAGGCCAATACAAATGTGGAAATTGGGGGGTACACAATCCCAAAAGGTGCACACGTGCTAGTGAACGTGTGGGCTATTGGGAGAAATTCAAGCGTGTGGGAGAATGCAAAGGTGTTTTCACCCGAGAGGTTCTTGAACACCAATATTGATGTGAAAGGTGGAAACTACGAGCTTACACCGTTCGGTGGTGGGCGTAGAATTTGTCTTGGCTTGCCCTTAGCCATGAGGATGTTGTATTTGATGTTGGGTTCTCTTGTGAACTGTTTCAATTGGAAACTTGAAGAAGATGGTATGAACATGAACATGAACATGGAAGACAAGTTTGGAATAAGTTTAAGGAAGGCTGAACCAGTTAGAGTTATTCCCGAGAAAGTAATGTGA 1479 0.4314 MEFVSCILLLVLALATFAQTLQWVGSRRRSKLPPGPYPLPMIGNLVQLGTKPHQSLAHLAQIHGPIMSIKLGQVTTIVVSSPHMAKEVLQTHDRSFSDKAVPQAVHVHNHHNHSVAFLPVSPLWRHLRKISNQNLFSNNTLDSNQNLRRNKLHDLINDIHQSSLLGEAVDIGKAVFKTSINLLSNTMFSLDLVHSAGSVGDFKDLVVNIMEECGRPNLADFFPVLKIIDPQGIRSRNSVYAGKIIHTFRDLIHQRLKLREDQGLDSNNDMLNTLLNSQEMNQTMIQHLALTLFVAGTDTITSTLEWAMAELVQNEKAMSKAKQELEEIIGKGKPVEESDIAKLPYLQAVIKETFRLHPSVPFLVPRKANTNVEIGGYTIPKGAHVLVNVWAIGRNSSVWENAKVFSPERFLNTNIDVKGGNYELTPFGGGRRICLGLPLAMRMLYLMLGSLVNCFNWKLEEDGMNMNMNMEDKFGISLRKAEPVRVIPEKVM 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00184 492 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 490 - -
Cca04g00184 492 Gene3D Cytochrome P450 22 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 SUPERFAMILY Cytochrome P450 33 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 Coils Coil 308 331 - -
Cca04g00184 492 Pfam Cytochrome P450 33 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Cca04g00184 492 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00184 492 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00184 Cca-Chr4 1679830 1681847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00184 6 490 Cytochrome P450 AT2G45550 44.242 1.29e-150 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00184 - - gmx:100807166 704.131