Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00153 ATGGAACCATGGTTCACTCTCACTATTCTCTGTCTTTTCCTTTCAGCAATTCTCAAAATCATACGTAACATTCTCTTTCACCGTTGTCCCCTCCCTCCGGGTCCTCACAAATGCAACTTCACATTGCTAAGACAATACCTCACCGATCCAAAAACCATTCTCCAAAACCTTAATGCAAAATACGGTCCAATCTTCACTCTCCACGTTGGTTATTCTCACACAAACATTTTCATTGCGAATCGCTTCCTTGCGCACCAAGCTTTGATCCAACATGGCACTGTCTTCGCTGATCGCCCCAAAGCCAACCCCACCAACAAGGTTCTTAGTAGCAACCAACATGACATTCTCTTCAACTTCTATGGCCGCACGTGGCGCCTCCTCAGACGCAACCTCACTTCAAGAATTCTTCACCCTTCACATGTCAAGTCCCATGCACATGCACGTAAAAGGGTCTTGGACATGCTCTTACAATGTCTCAAATCTGATTTAAACTCTAGTGGCCCCATAAGGGTCATTGAGCACTTTCAATATGGCATGTTCAGTTTGCTGGTTTTGATGTGTTTCGGTGACAAACTCGGTGAGAAGGAAATAAGGGAAATTGAGGAGAGTCAACGTGGCATGCTTGTGAGCTTTGCTAGGTATAGTGTGTTGAACTTTTGGCCACCTGTCACTAGGGCTTTGTTCTGGAAGAGATGGAAAGAGTTCTTAAAGCTAAGGAGAGACCAAGAAGCTTTGTTGATTCCTCACATCAACGCTCGAAGGAAGGCCAAGGAAGAGAGAAGTGAATCTGTTTTGTCGTATGTTGATACTTTGTTGGATTTGCAAGTGTTGGATGATGGCAAAATTTGCAGCTTATGTTCGGAGTTTCTGAATGCTGGATCAGATACAACTTCAACTGCATTGGAGTGGATCATGGCGAATTTGGTGAAATATCATGATATTCAAGAAAGGGTTGTGGAGGAAATTAGAGGGGTAATGGTTGGAAGAGAGGGTGAGGAAGTGAAGGAGGAGGATTTGCATAAATTGCCTTATCTTAAGGCTGTGATATTGGAAGGATTGAGGCGTCACCCTCCTTTGCATTTTGTGGCTCCTCATAGTGTAACAAAGGATGTTGTTTTAAATGGCTATTTGGTGCCTAAATATGCATCTGTGAATTTCTTGGTGGCTGAGATAGGGAGGGACCCTACAGCTTGGGAGGACCCTATGGCCTTTAAGCCAGAGAGGTTCATGAACAATGGTGACACAACGTTTGACATAATGGGAAGGAAAGAGATCCACATGATGCCATTTGGGGCAGGGAGGAGAATGTGTCCTGGCTATGATTTGGCAATGATGCACTTAGAGTACTTTGTGGCCAATTTTGTTTGGAATTTTGAGTGGAAGGCTGTGGATGGAGACGAAGTTGATCTGTCAGAGAAGCTGCAATTCACAATCGTGATGAAGAATCCTTTGAAGGTTCATATATTACCTAGGCAATAG 1479 0.4395 MEPWFTLTILCLFLSAILKIIRNILFHRCPLPPGPHKCNFTLLRQYLTDPKTILQNLNAKYGPIFTLHVGYSHTNIFIANRFLAHQALIQHGTVFADRPKANPTNKVLSSNQHDILFNFYGRTWRLLRRNLTSRILHPSHVKSHAHARKRVLDMLLQCLKSDLNSSGPIRVIEHFQYGMFSLLVLMCFGDKLGEKEIREIEESQRGMLVSFARYSVLNFWPPVTRALFWKRWKEFLKLRRDQEALLIPHINARRKAKEERSESVLSYVDTLLDLQVLDDGKICSLCSEFLNAGSDTTSTALEWIMANLVKYHDIQERVVEEIRGVMVGREGEEVKEEDLHKLPYLKAVILEGLRRHPPLHFVAPHSVTKDVVLNGYLVPKYASVNFLVAEIGRDPTAWEDPMAFKPERFMNNGDTTFDIMGRKEIHMMPFGAGRRMCPGYDLAMMHLEYFVANFVWNFEWKAVDGDEVDLSEKLQFTIVMKNPLKVHILPRQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00153 492 SUPERFAMILY Cytochrome P450 32 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PANTHER CYTOCHROME P450 9 489 - -
Cca04g00153 492 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 489 - -
Cca04g00153 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Cca04g00153 492 Gene3D Cytochrome P450 27 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g00153 492 Pfam Cytochrome P450 32 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00153 Cca-Chr4 1394308 1395786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00153 1 492 Cytochrome P450 AT1G64940 53.101 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00153 K24184 - gmx:100816275 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00153 04 1394308 1395786 Cca04g00153 04 1394308 1395786 ECH