Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00114 ATGGCCATAGCAACCACTTCCATTCTTCTATCCTTTCTCATTCTTTCCCTCTTTGTGGCTGAAATCTATGCAAATAGACAAGTCAAAGCTCTTAACATACTTCACAAGTCCAAGTTCAGACGAAATTCACAAATCGATAAGAGTGATTTTGAGGTAGAGGAGTTGGTGCTTGATGGCATTGTTCATTCTCAAGAGGGTATCAAAGAAAAAGATAGAATTTTGAGGCTTCCGGGGCAACCCCAAGTGAATTTTTCTCAGTATGGAGGGTATGTCACTTTGGATAAATTTTCAGGACGTGCTTTTTACTATTActttgttgaagctcagcattctgaacaaacactaccacttcttctttggctcaatggagGTCCAGGATGTTCATCTCTTGCTTATGGAGCAATGCAAGAACTTGGACCTTTCCGAGTAAACAGTGACGGCAAAACACTACACAGAAATAGCTTTTCATGGAACAATGTTGCCAATGTTTTATTCCTCGAGTCACCCACTGGAGTAGGATTTTCCTATTCAAACAAATCATCAGATTATAACACCAATGGAGACAAGAAAACTGCTGCGGATAATTATTTATTCTTGGTGAATTGGTTGGAGAGATTTCCAGAATATAAGGATAGAGATTTCTACATTGCTGGGGAAAGCTATGCTGGGCATTATGTGCCTCAACTTGCACATACAATTCTTTATCATAACAAAAAGGCAAATAAGAAAATCATCAACCTCAAAGGAATCTTGATTGGAAATGCAGTGATCAACGATGAAACTGACACGCGAGGACTGTATGATTATCTTGCTAGCCATGCAATCATCTCAGACAGAGCAGCTTATATCAGCAAAGCTTGCGATTCCTCTTCATCAAAGATTCTGAAAAGTGATTGCGATGCAGCTGAAGATGAAACTGAGAAGGATCTTGAATACATTGATTTATACAATATTTATGCTCCACTATGCAAGAATACTAATCTCACGGCCCTGCCCAAAAGGAGCACTGTTGTCACTGATCCATGCAGTGAGTATTATGTGTATGCATATCTTAATAGAAAGGATGTTCAAGAGGCTCTCCATGCAAATGTCACCAACCTCAAATATGACTGGGAACCCTGCAGTGATGTCATTACTAAGTGGGTAGATAGCTCTTCCACAGTCCTTCCACTTTTACATGAATTCCTCCAAAATAACCTCAGGGTGTGGATTTTCAGTGGTGACACAGATGGAAGGGTGCCAATTACTTCAACCAAGTATTCGATTTACAAGATGAACCTTCCTGTTAAAACTGTGTGGCATCCTTGGTTTTCCTATGGAGAGGTTGGTGGCTATGCAGAAGTATACAAGGGAGGCCTAACATTAGTTACGGTGAGGGAAGCAGGGCATCAAGTGCCAAGTTACCAACCAGCAAGAGCCCTAACTTTGATAAAATATTTCCTAGAGGGCACTCCTCTTCCTGGTCCTCCCAAAAGACATGCCTAG 1485 0.3912 MAIATTSILLSFLILSLFVAEIYANRQVKALNILHKSKFRRNSQIDKSDFEVEELVLDGIVHSQEGIKEKDRILRLPGQPQVNFSQYGGYVTLDKFSGRAFYYYFVEAQHSEQTLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHRNSFSWNNVANVLFLESPTGVGFSYSNKSSDYNTNGDKKTAADNYLFLVNWLERFPEYKDRDFYIAGESYAGHYVPQLAHTILYHNKKANKKIINLKGILIGNAVINDETDTRGLYDYLASHAIISDRAAYISKACDSSSSKILKSDCDAAEDETEKDLEYIDLYNIYAPLCKNTNLTALPKRSTVVTDPCSEYYVYAYLNRKDVQEALHANVTNLKYDWEPCSDVITKWVDSSSTVLPLLHEFLQNNLRVWIFSGDTDGRVPITSTKYSIYKMNLPVKTVWHPWFSYGEVGGYAEVYKGGLTLVTVREAGHQVPSYQPARALTLIKYFLEGTPLPGPPKRHA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00114 494 Gene3D alpha/beta hydrolase 67 325 IPR029058 -
Cca04g00114 494 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
Cca04g00114 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 165 IPR001563 GO:0004185|GO:0006508
Cca04g00114 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 176 IPR001563 GO:0004185|GO:0006508
Cca04g00114 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Cca04g00114 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 453 466 IPR001563 GO:0004185|GO:0006508
Cca04g00114 494 Pfam Serine carboxypeptidase 77 483 IPR001563 GO:0004185|GO:0006508
Cca04g00114 494 SUPERFAMILY alpha/beta-Hydrolases 64 488 IPR029058 -
Cca04g00114 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 58 488 IPR001563 GO:0004185|GO:0006508
Cca04g00114 494 Gene3D - 342 379 - -
Cca04g00114 494 PANTHER CARBOXYPEPTIDASE 58 488 - -
Cca04g00114 494 Gene3D - 388 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00114 Cca-Chr4 1048447 1056561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00114 350 486 Calmodulin-binding Proteins AT2G22960 28.467 7.98e-13 65.1