Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00074 ATGAAACCTTTTCTTCTTTTTCTCACATTCTCCTTCCTTTGCCAAACACACCCACTCCTAGTTTTCTCTGCCACAACCCTGCCCCTTCAACTCATCACCCTCCTCTCAATAAAATCCTCCCTCTTAGACCCTCTCAATAACCTCCATGACTGGGACCCCTCCCCCACTTCCAACTCCAATCACCAAGACCCAATATGGTGTTCATGGAGAGGCATCACATGCCACCCCAAAACATCACAAATCACCACCCTGGACCTCTCCCACCTCAACCTCTCCGGCACAGTCTCACCCCAAATCCGCCACCTTTCCACCTTAAACCACTTAAACCTCAGTGGAAATGATTTCAGCGGGAGTTTCCAATCCTCTATTTTTGAACTAACAGAGCTGAGAACTCTAGACATCAGCCGCAACTCCTTCAACTCAACCTTCCCACCCGGCATATCAAAGCTCAAGTTCCTCAGATTCTTCAACGCTTACAGCAACAGCTTCACCGGCTCTCTCCCCCAAGACTTAACAGGCCTTCGTTTCCTCGAGCAGCTCAACCTCGGCGGAAGCTACTTCAGCGGCACAATTCCACCAGGTTACGGCACTTTCCCCAGACTCAAGTTCATAGACTTAGCAGGTAACAACTTGGTAGGTCCACTCCCTCCCCAGCTAGGCCACTTGGCTGAACTGGAACACTTGGAAATCGGATACAACAATTTCTCAGGAACATTGCCCCTGGAACTGGCATTGCTGTCTAACCTCAAATACTTAGACATCTCAACAGCTAACATCTCAGGGAACGTGATCCCGGAGCTGGGAAACCTCACCAAGCTGGAAACCCTTCTGCTGTTCAGAAACCGGTTAACAGGGGAAATCCCACCAAGCATAGGAAAATTGAAGTCCCTGAAAGGCCTTGACCTGTCAGATAACGAACTCACAGGACCCATCCCCACACAAGTCACCATGCTAAAGGAACTAACCATGCTCAACCTAATGAACAACAACCTAACCGGAGAAATACCAGAGGGAATCGGAGAGTTACCAAAGCTGGAGACTCTGTTTCTCTTCAACAACTCACTCACCGGAACCCTACCTCAGCAACTAGGCTCCAACGGTTTACTACAGAGACTAGACGTGTCCACAAACTCACTGGAAGGTCCAATCCCTAGAAATGTCTGCAATGGCAACAAACTGGTGAGACTCATACTCTTCCTCAACAACTTCACCCGCTCTCTCCCACCCTCCCTCGCCAACTGCACCTCACTCACTAGGGTTCGCATCCAAAACAATTTCCTCAACGGTTCCATCCCCCAAGGCCTCACGCTCCTCCCTAACCTAACGTTCCTCGACCTCAGCAACAACAACTTCCAAGGTCAAGTTCCAGAACACTTGGGAAACTTGCAGTACTTCAACATCTCCGGAAACTCCTTCGGAACTCCCCTACCTTCCTCCATTTGGAACGCCACTAATCTTCAGATCTTCTCCGCGGCTTTCTCCAACATCACCGGCCAAATTCCCGATTTCATAGGCTGCCAGACACTCTACAAGCTCGAATTGCATGGAAACGCCATCAACGGAACTATTCCCTGGGATATCGGACACTGCCAGAAACTCATTGTGCTAAATCTGAGCCGAAACGCACTCACCGGAATCATTCCCTGGGAAATCTCCGTTCTACCTTCCATCACCGACGTTGATCTCTCTCACAATTCTCTCACCGGAACCATACCATCGAACTTCAACAACTGCACCACGCTCGAGAATTTCAACGTCAGCTTCAACTCCCTCACCGGTCCGATTCCGTCGTCCGGCATCTTCCCTAACCTGCATCCTTCCTCCTACTCCGGGAACCAAGGCCTCTGCGGCGGCGTGCTGGCGAAGCCCTGCGCCGCGGACGCCCTGGCCGCGGCGGAAAACCAGGTCGACGTCCGGCGGCAGCAGCCGAAGAAGACAGCAGGTGCAATCGTGTGGATCGTGGCGGCGGCGTTCGGAATCGGGCTGTTCGTGCTGGTGGCGGGGACGCGGTGCTTCCACGCGAACTACAAGCGACGGTTCGGCGACGAGGTCGGGCCGTGGAAGCTAACGGCGTTCCAGCGGCTGAACTTCAGGGCGGAGGACGTGCTGGAGTGTTTGTCGATGTCGGATAAGATACTAGGGATGGGATCGACGGGAACGGTTTACCGAGCGGAGATGCCAGGTGGCGAGATGATAGCCGTGAAGAAATTATGGGGAAAACAGAAAGAGAATATCCGACGGCGGAGAGGCGTTCTGGCTGAGGTGGAGGTGTTGGGAAACGTGAGGCATAGGAATATCGTTAGGTTGTTAGGGTGCTGCAGCAACAGGGAGTGCACCATGCTGCTTTACGAGTACATGCCCAATGGCAACTTGGATGACTTGTTGCATGCAAAGAATAAAGGCGATAATTTAGTTGCTGACTGGTTCACCCGGTACAAGATCGCCTTGGGCGTCGCTCAGGGAATTTGCTATCTTCACCACGACTGTGACCCCGTCATCGTTCACCGCGATCTCAAACCTAGCAACATTTTATTGGACGCTGACATGGAGGCCAGAGTCGCTGATTTTGGTGTTGCAAAGTTGATTCAGACCGATGAATCCATGTCTGTCATTGCCGGATCCTATGGCTACATTGCTCCTGAATATGCATACACCCTCCAAGTGGATGAGAAGAGTGATATCTACAGCTACGGAGTGGTCTTAATGGAGATCCTAAGCGGAAAACGTTCGGTGGATTCAGAATTCGGAGATGGGAACAGCATCGTGGATTGGGTGAGGTCAAAGATAAAGTCAAAAGACGGCGTGAACGATATACTGGACAAAAATGCAGGTGCAGGGTGCACTCCGGTGAGGGAGGAAATGATCCAAATGCTTAGAATTGCCTTGCTTTGCACAAGCAGGAATCCAGCGGATAGGCCTTCAATGAGGGATGTTGTGTTGATGCTGCAAGAGGCCAAGCCAAAGAGGAAATTGCTTCATAGTGTTGGGGACAATGTGCTTGCTGTTGCTGACATTCCTTTGCCACAAAAGCCAAACCTCGATCAATGCTAG 3051 0.5136 MKPFLLFLTFSFLCQTHPLLVFSATTLPLQLITLLSIKSSLLDPLNNLHDWDPSPTSNSNHQDPIWCSWRGITCHPKTSQITTLDLSHLNLSGTVSPQIRHLSTLNHLNLSGNDFSGSFQSSIFELTELRTLDISRNSFNSTFPPGISKLKFLRFFNAYSNSFTGSLPQDLTGLRFLEQLNLGGSYFSGTIPPGYGTFPRLKFIDLAGNNLVGPLPPQLGHLAELEHLEIGYNNFSGTLPLELALLSNLKYLDISTANISGNVIPELGNLTKLETLLLFRNRLTGEIPPSIGKLKSLKGLDLSDNELTGPIPTQVTMLKELTMLNLMNNNLTGEIPEGIGELPKLETLFLFNNSLTGTLPQQLGSNGLLQRLDVSTNSLEGPIPRNVCNGNKLVRLILFLNNFTRSLPPSLANCTSLTRVRIQNNFLNGSIPQGLTLLPNLTFLDLSNNNFQGQVPEHLGNLQYFNISGNSFGTPLPSSIWNATNLQIFSAAFSNITGQIPDFIGCQTLYKLELHGNAINGTIPWDIGHCQKLIVLNLSRNALTGIIPWEISVLPSITDVDLSHNSLTGTIPSNFNNCTTLENFNVSFNSLTGPIPSSGIFPNLHPSSYSGNQGLCGGVLAKPCAADALAAAENQVDVRRQQPKKTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYKRRFGDEVGPWKLTAFQRLNFRAEDVLECLSMSDKILGMGSTGTVYRAEMPGGEMIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGDNLVADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDADMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDSEFGDGNSIVDWVRSKIKSKDGVNDILDKNAGAGCTPVREEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLLHSVGDNVLAVADIPLPQKPNLDQC 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00074 1016 Gene3D Ribonuclease Inhibitor 184 285 IPR032675 -
Cca04g00074 1016 Gene3D Transferase(Phosphotransferase) domain 1 786 999 - -
Cca04g00074 1016 Gene3D Phosphorylase Kinase; domain 1 692 785 - -
Cca04g00074 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Cca04g00074 1016 Gene3D Ribonuclease Inhibitor 30 183 IPR032675 -
Cca04g00074 1016 Gene3D Ribonuclease Inhibitor 286 387 IPR032675 -
Cca04g00074 1016 ProSiteProfiles Protein kinase domain profile. 707 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g00074 1016 SMART LRR_typ_2 554 577 IPR003591 -
Cca04g00074 1016 SMART LRR_typ_2 438 462 IPR003591 -
Cca04g00074 1016 SMART LRR_typ_2 198 222 IPR003591 -
Cca04g00074 1016 SMART LRR_typ_2 318 340 IPR003591 -
Cca04g00074 1016 SMART LRR_typ_2 270 294 IPR003591 -
Cca04g00074 1016 SMART LRR_typ_2 342 366 IPR003591 -
Cca04g00074 1016 SMART LRR_typ_2 126 150 IPR003591 -
Cca04g00074 1016 ProSitePatterns Protein kinases ATP-binding region signature. 713 736 IPR017441 GO:0005524
Cca04g00074 1016 SUPERFAMILY RNI-like 287 595 - -
Cca04g00074 1016 SMART serkin_6 707 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g00074 1016 Gene3D Ribonuclease Inhibitor 506 626 IPR032675 -
Cca04g00074 1016 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 1001 - -
Cca04g00074 1016 Pfam Protein kinase domain 710 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g00074 1016 SUPERFAMILY L domain-like 54 383 - -
Cca04g00074 1016 Pfam Leucine Rich Repeat 440 462 IPR001611 GO:0005515
Cca04g00074 1016 Pfam Leucine rich repeat N-terminal domain 30 74 IPR013210 -
Cca04g00074 1016 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 4 1001 - -
Cca04g00074 1016 Pfam Leucine rich repeat 272 331 IPR001611 GO:0005515
Cca04g00074 1016 Pfam Leucine rich repeat 508 567 IPR001611 GO:0005515
Cca04g00074 1016 SUPERFAMILY Protein kinase-like (PK-like) 710 982 IPR011009 -
Cca04g00074 1016 Gene3D Ribonuclease Inhibitor 388 460 IPR032675 -
Cca04g00074 1016 Gene3D Ribonuclease Inhibitor 461 505 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00074 Cca-Chr4 667395 671512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00074 3 999 Receptor kinase-like Gene Family AT1G08590 43.164 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Cca04g00074 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00074 - - gmx:100809695 1801.18