Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00032 ATGAATTACTCATTCAGTGCCAATACTTGTGAGATAGTGGAAGCAAGGGAAGAGATCATTTCTGAGTTCAAAATAGATGAAAAGCCTGAGAGTAGTTGTGCCCACAAATCAAGAAAAAAGTATTCTATAGAGAATGATATCAATCGTCTCTTGCAGGCTATTGATATTAATAATTCAGCTAGAGTTCTTAATACACCATGTTCACAGAAGAGTGCTCTTAAAAAACCTATAAAAGCCACTCCATCTCAGGCATCAAGAATTGGTCTCTCGGAACCTGTAAGTTTAAAGCAGGCATTTAGAAGGCTGTGCATCTCACAGGCATCAGAAATGGCTGCATTGAAGCGACTATCAAAATCATCCCCTTCGTCAAGAGTATCAGAGGCTGGAACTATAAAAAACTTGTACACAACGTCACCAGTAGTAGACGAAAGACATGGGGTCTTGGTGGAACTCTCCCTTGTGCCAGAGATATCTAGTAGACCTTCTGATGATAAGTTGGCCAGCAATGAGATTCATGAGATATCAAATTCAAGTGCTCATCATTCTACTCCTTTTGTTAATGCAACAAACCCAAAAACAATGCCAACCAGATTATCACATCGAAGCCAAATTGTCCCTCTTTCATCAGAGATTCAGGGTGAGAAGCTAGTCACGAGGCTTGAAAAACAGGCACTAGCAGACTCATCATCTGCTTCCTGTCCTAGTAATGAAGTGCTGGAGTTGGAGATTAGACTCAAAACGCTCCCTGATTCCTCCAGCAAAGATTCTCTCAGTTCTTCATTGCCAGATAAGGGGGTGGAAGCAAAGTCAATTTCTCCATCCAGTTCTGGAACAGGTAATGGGGTGGATAAAGCCACAAGTAGTAATACATCATTGGCAAAGCCAATAGGGAATGACAAGAACTCTCTTAAGAAGGAAGTGAAGCAAGATTTATGTTCTTCATCGAGCTGCTCAAATCCATGCCCCAGAAAAGTTGGCAATGCTTTGGCTTCCAGCACAAGTAATTTGAACAACGTGAATAACAATTCTGATTCAAAGAATGAAATGAAGGTAAACGAGAAACTGTCCTTCAACCATTCAAACCATAGCATTGATGTTTACTCAGGTAATGTCAGGAAGGATTCAAGCAAACCTGGTTTCTGTTTGGCTAGCAATAAGAGAACTAGGTTTCCAGTAACAAAATTTGATGAGAAAACAATATCAAATGTAAAGAGTGAGTTCTCACAAAGTTCAAAAAGTAGCATTGGTGATTACCGTTGTAGTGGGCACAGACCTCACATGTCAAAACACACAAGATGGGAAGCAGTTCGTGTTATTATGCAGCATCATGGTAATTTAAGTGCAAGGAACTTCAAGCTGCTCAAGAGGCTTGGTCGTGGGGACATTGGAACTGTTTATCTTGCCCAACTGATTGGTACCAACAGCCTTTTTGCACTAAAAGTGGTGGAGAATGACTTTGTGGTAAACCAGAAGAAAATGCTCAGGGCCCAAACTGAAAGAGAGATTCTGCAGATGCTGGATCATCCGTTTCTTCCTACACTATATGCCCATATTGCAACGGATAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGTGGAGATCTACATGTGCTACGCCAGAGGCAACCATCTAAGAGTTTTTCAGAACAAGCTACCAGGTTTTATGTTGCTGAAGTTCTCCTTGCCCTGGAGTATTTGCACATGCTAGGAGTTGTATATAGAGACCTCAAGCCAGAAAATATTCTGGTGCGAGAAGATGGCCACATCATGCTTACTGATTTTGACCTATCACTCAGATGTTGTGTCAATCCAATGTTGGTCAAGTCATCCTCACCAAATGTGAATCCAACAATGACGTCCAGTTCCTGTTCTGAGGCAAACTGCATGCACCCTTTCTGTCTCCAACCAGATTGGCATGTCTCCTGTACTCCTATTCTACTATCAGGTGGAGCAAAATCTCAAAAAGTTAAGGCTGAAATAGGTGGTCAGGTTGGTCCACTGCCACAGCTTGTAGTGGAGCCTACCAATGCTCGATCAAACTCGTTTGTTGGAACCTGTGAATATCTTGCTCCGGAAATCATAAAAGGTGAGGGTCATGGGAATGCTGTAGATTGGTGGACTTTAGGTATATTATTGTTTGAGCTTTTATATGGTAAAACTCCCTTTAAGGGCCATGCAAATGAAGATACATTAACCAATGTTGTGTCAAAGAGCCTTAAGTTCCCAGATAGTCCTATAGTGAGTTTTGGAGCAAGAGATTTGATGAGGCTATTGTTGATAAAAGATCCTGAAAGTCGATTAGGTTCTGTAAAAGGTGCTGCTGAAATAAGGCAGCATTCCTTCTTTGAAGGCCTCAACTGGGCTCTTATACGCTGTGCACCACCACCCGAGCTCCCCAAATTTCGTGATTTTGGAACTAGTCTTCAATCTATGGACAAAAAAGCCAACCATTTAGAGGCTACACAAGATTGTCAAGAGTTTGACCTGTTTTAG 2496 0.4167 MNYSFSANTCEIVEAREEIISEFKIDEKPESSCAHKSRKKYSIENDINRLLQAIDINNSARVLNTPCSQKSALKKPIKATPSQASRIGLSEPVSLKQAFRRLCISQASEMAALKRLSKSSPSSRVSEAGTIKNLYTTSPVVDERHGVLVELSLVPEISSRPSDDKLASNEIHEISNSSAHHSTPFVNATNPKTMPTRLSHRSQIVPLSSEIQGEKLVTRLEKQALADSSSASCPSNEVLELEIRLKTLPDSSSKDSLSSSLPDKGVEAKSISPSSSGTGNGVDKATSSNTSLAKPIGNDKNSLKKEVKQDLCSSSSCSNPCPRKVGNALASSTSNLNNVNNNSDSKNEMKVNEKLSFNHSNHSIDVYSGNVRKDSSKPGFCLASNKRTRFPVTKFDEKTISNVKSEFSQSSKSSIGDYRCSGHRPHMSKHTRWEAVRVIMQHHGNLSARNFKLLKRLGRGDIGTVYLAQLIGTNSLFALKVVENDFVVNQKKMLRAQTEREILQMLDHPFLPTLYAHIATDKLSCLVMEYCPGGDLHVLRQRQPSKSFSEQATRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCCVNPMLVKSSSPNVNPTMTSSSCSEANCMHPFCLQPDWHVSCTPILLSGGAKSQKVKAEIGGQVGPLPQLVVEPTNARSNSFVGTCEYLAPEIIKGEGHGNAVDWWTLGILLFELLYGKTPFKGHANEDTLTNVVSKSLKFPDSPIVSFGARDLMRLLLIKDPESRLGSVKGAAEIRQHSFFEGLNWALIRCAPPPELPKFRDFGTSLQSMDKKANHLEATQDCQEFDLF 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00032 831 Pfam Protein kinase domain 452 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g00032 831 Pfam Protein kinase domain 680 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g00032 831 ProSiteProfiles Protein kinase domain profile. 451 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g00032 831 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 7 831 - -
Cca04g00032 831 MobiDBLite consensus disorder prediction 250 297 - -
Cca04g00032 831 Gene3D Transferase(Phosphotransferase) domain 1 677 801 - -
Cca04g00032 831 Gene3D Transferase(Phosphotransferase) domain 1 535 601 - -
Cca04g00032 831 MobiDBLite consensus disorder prediction 174 206 - -
Cca04g00032 831 CDD STKc_phototropin_like 451 806 - -
Cca04g00032 831 PANTHER FLIPPASE KINASE 1-RELATED 7 831 - -
Cca04g00032 831 SUPERFAMILY Protein kinase-like (PK-like) 427 804 IPR011009 -
Cca04g00032 831 SMART serkin_6 451 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca04g00032 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Cca04g00032 831 MobiDBLite consensus disorder prediction 249 303 - -
Cca04g00032 831 Gene3D Phosphorylase Kinase; domain 1 450 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00032 Cca-Chr4 333262 337701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00032 7 831 AGC Kinase Gene Family AT3G52890 43.617 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Cca04g00032 Pkinase 4.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00032 - - ccaj:109798461 1585.47