Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03240 ATGTCTGGAGAAGCAGATCGAACGAGCATGGAGCTGGAAGAGGAGAAGAACCTTAAGCTGAAAGACAGAAAGGTATCATGGGCAAAGCTTCGCCGCGTAGATTCTCTCAATTTGGAAGCTGGAAGAGTTTCTATGGTTGCACACGACCCTTTCAAGATGAGTTGGAGGACGACGCTGACCTTGGCATTTCAAAGCATAGGGGTTGTATACGGTGATATTGGTACATCACCGCTTTATGTGTACGCCAGCACCTTCACTAAAAAAATTAACAACAACGATGACATTCTTGGTGTATTGTCTCTCATCATCTACACCATTGTGTTCATACCTTTGCTTAAATACGTCTTCATCGTATTGTGGGCCAACGACAACGGCAACGGTGGGGCGTTTGCACTGTACTCGTTAATATGTAGGCATATAAAGATGAGTTTGATTCCAAATCAACAACCAGAAGACAGGGAACTTTCTAATTACAAACTTGAAACACCTTCTAGTGAGGTGAAACGAGCCCACAAAGTAAAGCAGATACTTGAGAACAGTCATTTTGCGCGGATTGCGCTTTTATTTCTAGCTGTAATGGGAACTTCCATGGTCATAGGAGATGGAATTCTTACTCCATCAATTTCAGTCCTTTCTGCGGTGAGTGGGATCAGTACATCGTTGGGTCAAGGAGCTGTTGTGGGGATCACTATAGCAATCTTGGTAGTCCTATTTTGTATGCAACGATTCGGTACTGATAAAGTGGGATTCACATTCGCTCCAATCATTTTGTTGTGGTTTTTATTCATCGGTGGAATTGGCCTTTACAATTTATTCAAATATGACATTGGAGTATTACGTGCTTTTAATCCAAAATACATATATGATTACTTCAAACGGAACGGCAAGGACGGATGGATATCGCTTGGAGGAGTCTTTTTGTGCATAACAGGATCGGAGGCCATGTTTGCTGACTTGGGTCACTTTAATGTACGAGCCATTCAAATTAGCTTTTCTTGCATTACGTGTCCTGCAATAGTGATTGCATACATAGGGCAAGCAGCATTTCTACGGAAGTTTCCGGAGAAAGTAAATAATACTTTCTATGATAGTATACCGGATCCCTTATATTGGCCAACATTTGTTGTGGCTGTTGCTGCTGCCATTATAGCGAGCCAGGCAATGATTTCAGGAGCATTCTCCATTATATCCCAGGCCCTAAGTCTAGGTTGTTTCCCACGAGTTAGGGTAGTGCATACTTCCACTAAACATCAGGGTCAGGTGTATATTCCTGAGGTCAACTACATGTTCATGATCGCGTGTATTGTGGTCTGTGCTGCCTTCAAGACCACAGAGAAGATTAGCCATGCATATGGGATTGCAGTTATTGGTGATATGATGATCTCAACAACACTGGTTTCGCTTATTATGCTGGTTATATGGAAAAAGAGTATATGGCTCGTGGGTCTATTCTTTCTGGGATTCGGTTTCATAGAGATAGTTTATTTCTCTTCTCAACTAACCAAGTTCACAGGAGGAGGGTATCTTCCAATTGTATTAGCTCTGATATTGACGACGTTGATGGGAAGCTGGCATTATGTGCACAAAGAAAGATACATGTTTGAACTAAAGAACAAGGTTTCGGGTGCGTATTTGAACGAAGTGGCGAGCAACCCAGACGTAAGGCGGGTGCCAGGAATTGGATTTCTGTATTCTGAGCTAGTACAAGGCATTCCTCCTATTTTCCCACACCTAATAGGCAGCATACCATCTATCCATTCAGTTGTTGTGTTCGTCTCCATCAAGGCAATTCCTATCAGCAGAGTTGCATCAGAGGAGAGGTTTTTGTTTAGGCAGGTGGAGCCAAGGGAGTATAGGATTTTCCGTTGTGTTGTGAGGCATGGTTACAATGACAACGACGTTCTTGAGGATCCTGCTGAGTTTGAGTCACAGTTGATACAAAACCTCAAGGCATTCATTCAACAAGAGAACTTTATGCTGGAGACTGAGGGACCTACTGCAACTGAACAGGCACCAACTACCAGTGAGAGTGATGTGCAACTTCAAGGTAAAGAAGGAAAGGGTAGGTCTGCGTCCGCTAGCAGCAGAATAATCCCAAACCAATCTTCTTCTGTTGCTTCTCAAGCCTCTTCCGACTCCATTCGACTCCATTCGACCCAGTCATCCGCTTTCGTTGCCCCACCCTTCCAGGGAGCTGAAGAGGAAATCAAATTCATTGACAAAGCGTTGGAGAAGGGCGTCGTGTATATGCTAGCAGAAGCAGAGGTTGTAGCTCACCCAAATTCCTCCATCCTCAACAAGATTGTTGTCAACTATGTTTATAGCTTCTTGAGAAAGAACTTCAGACAAGGCCAGAATTTGATGGCAATCCCACGCAACAGACTTCTCAAGGTTGGAATGACATATGAAATATGA 2415 0.434 MSGEADRTSMELEEEKNLKLKDRKVSWAKLRRVDSLNLEAGRVSMVAHDPFKMSWRTTLTLAFQSIGVVYGDIGTSPLYVYASTFTKKINNNDDILGVLSLIIYTIVFIPLLKYVFIVLWANDNGNGGAFALYSLICRHIKMSLIPNQQPEDRELSNYKLETPSSEVKRAHKVKQILENSHFARIALLFLAVMGTSMVIGDGILTPSISVLSAVSGISTSLGQGAVVGITIAILVVLFCMQRFGTDKVGFTFAPIILLWFLFIGGIGLYNLFKYDIGVLRAFNPKYIYDYFKRNGKDGWISLGGVFLCITGSEAMFADLGHFNVRAIQISFSCITCPAIVIAYIGQAAFLRKFPEKVNNTFYDSIPDPLYWPTFVVAVAAAIIASQAMISGAFSIISQALSLGCFPRVRVVHTSTKHQGQVYIPEVNYMFMIACIVVCAAFKTTEKISHAYGIAVIGDMMISTTLVSLIMLVIWKKSIWLVGLFFLGFGFIEIVYFSSQLTKFTGGGYLPIVLALILTTLMGSWHYVHKERYMFELKNKVSGAYLNEVASNPDVRRVPGIGFLYSELVQGIPPIFPHLIGSIPSIHSVVVFVSIKAIPISRVASEERFLFRQVEPREYRIFRCVVRHGYNDNDVLEDPAEFESQLIQNLKAFIQQENFMLETEGPTATEQAPTTSESDVQLQGKEGKGRSASASSRIIPNQSSSVASQASSDSIRLHSTQSSAFVAPPFQGAEEEIKFIDKALEKGVVYMLAEAEVVAHPNSSILNKIVVNYVYSFLRKNFRQGQNLMAIPRNRLLKVGMTYEI 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03240 804 TIGRFAM kup: potassium uptake protein 61 804 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca03g03240 804 PANTHER POTASSIUM TRANSPORTER 5 19 803 - -
Cca03g03240 804 MobiDBLite consensus disorder prediction 663 712 - -
Cca03g03240 804 Pfam K+ potassium transporter 62 631 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca03g03240 804 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 19 803 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03240 Cca-Chr3 53769375 53774909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03240 1 804 Inorganic Solute Cotransporters AT4G13420 57.869 0.0 955
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03240 K03549 - gmx:100814313 1318.91