Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03234 ATGGCTTCTTCTCCCTCGTACGCTTGCATCAtcattctgctctccctctccttctccttctccttGGTGgtcacagtcacagtcacagtcacagCAAGAGAAAAGCAAACATTCATAGTGCAAGTCCAGCAAGAAGCGAAGCCATCCATCTTCCCAACGCACAGGCACTGGTACGAGTCTTCCCTGCCGGACAAGGCCTCCATAATCCACACCTACCAAACAGTCTTTCACGGATTCTCAGCAACCCTCTCCCATGCCGAGGCACAAAAGCTGCAATCACTCTCCCACGTCATAACCCTCATACCCGAGCACCTGCGCCACCTCCACACCACGCGCTCCCCTCACTTCCTCGGCCTCAACACCGCCGACACCGCCGGCTTACTCAAGGAGACCGACTTCGGCTCCGATCTCGTCATCGGAGTCATCGACACCGGCATCTCCCCCGAGAGCCAGAGCTTCAACGACCGCGATCTCGGCCTCCCTCCCCCCAACTGGAAGGGCCAGTGCGTCGCCGGAGAACACTTCCCTCCCACTTCATGCAACCGCAAGCTCATCGGAGCCCGCTACTTCTGCGCCGGCTACGAAGCCACCAACGGCAAAATGAACAGCACCCTCGAGTATCGCTCCCCCAGAGACTCCGACGGCCACGGCACCCACACCGCCTCCATCGCCGCCGGAAGGTACGTCTTCCCGGCCTCCACCATGGGCTACGCCAAAGGAATGGCCGCCGGGATGGCTCCCAAGGCTCGCCTCGCCGTCTACAAGGTCTGCTGGAACGCCGGCTGCTACGACTCCGACATCCTGGCCGCATTCGACGCCGCCGTGGCCGACGGTGTGGATGTGATCTCCCTCAGCGTGGGGGGCGTGGTGGTGCCCTACCACCTGGACGTGATCGCCGTGGGGGCCTTCGGAGCCAGCGAGGCTGGCGTCTTCGTCTCGGCCTCCGCGGGGAACGGAGGCCCCGGCGGCCTGACGGTGACGAATGTGGCACCCTGGATGACGACGGTGGGTGCGGGAAGCATAGACAGAGATTTCCCGGCGGATGTTATGCTGGGGAACGGCAGGGTGATTGGCGGCGTGAGTGTGTACGGTGGACCCGGTCTGACTCCGGGACGGCTCTACCCGCTGCTCTATGCGGGTTCTGACGGTTACTCTTCCTCTCTCTGCTTGGAAGATTCGTTGGATCCCAAGTCCGTGAAAGGGAAGATTGTGGTGTGCGAGAGAGGCGTTAATTCAAGAGCCGAGAAAGGGCAAGTGGTGAAGAAGGGCGGAGGAGTTGGCATGATTTTGACCAACGGACCCTTCGACGGCGAGGGTTTGGTTGCCGACTGCCACGTCCTCCCCGCCACCTCGGTGGGCTCGGCCGCCGGTGACGAGATTCGTCGATACATCTCTCTGGCCTCCCCACCCACGGCAACCATAATATTCAAGGGCACTCGCGTTGGGATGATGCCAGCGCCCAAGGTGGCATCCTTTTCCGGCAGAGGGCCTAATCCCGAGTCAGCCGAGATTCTTAAACCGGATGTTATAGCCCCTGGGTTGAACATTCTTGGCGCATGGCCTAACACAGTTGCACCTTCTGGGCTTGCTTCCGACTCGCGTAGGAGCGACTTCAACATACTGTCGGGCACTTCCATGGCATGCCCTCACGTGTCTGGGCTGGGTGCATTGCTGAAAGCGGCCCACCCGGATTGGAGCCCTGCTGCAATCAGATCTGCGCTTGTGACTACTGCTTACAGTGTGGACAAGGAAGGAGGGCCTATGGTGGATGAGTCTACTGGGAATGTTTCCTCATTGTTTGACTATGGGGCTGGGCATGTTGACCCCCAGAAGGCCATCCACCCTGGCCTCATTTATGACATCTCCACCTACGATTATGTGGATTTCCTCTGCAATTCCAATTACAGCACCCACAATATCCGAGTCATCACCAGAAAGGTTGCTGAGTGCAGTGGCGCTAAGAGGGCTGGGCACGCTGGGAATCTCAATTACCCCTCTCTATCCGCCGTCTTTCAGCAGTATGGAAAGCACCTCATGTCCACTCACTTCATTAGAACCGTCACTAACGTTGGAGACCCCCACTCCGTCTATAAAGTCACCATTGTACCTCCTCCCCACACCGAGCTCACCGTGGAGCCAGACACGCTGTCCTTCAGGAGGTTGGGCCAGAAATTGAACTTCCTCGTTAGCCTGCAAACCATGCCGGTTAACCTTTCCCCCGGGAGTTCTACTGTCAGGACTGGTTCCATAGTTTGGTCTGATGCCAAACACACCGTCACCACTCCCTTGCTTCTCACCATGCACCAACCTCTCTGA 2316 0.5725 MASSPSYACIIILLSLSFSFSLVVTVTVTVTAREKQTFIVQVQQEAKPSIFPTHRHWYESSLPDKASIIHTYQTVFHGFSATLSHAEAQKLQSLSHVITLIPEHLRHLHTTRSPHFLGLNTADTAGLLKETDFGSDLVIGVIDTGISPESQSFNDRDLGLPPPNWKGQCVAGEHFPPTSCNRKLIGARYFCAGYEATNGKMNSTLEYRSPRDSDGHGTHTASIAAGRYVFPASTMGYAKGMAAGMAPKARLAVYKVCWNAGCYDSDILAAFDAAVADGVDVISLSVGGVVVPYHLDVIAVGAFGASEAGVFVSASAGNGGPGGLTVTNVAPWMTTVGAGSIDRDFPADVMLGNGRVIGGVSVYGGPGLTPGRLYPLLYAGSDGYSSSLCLEDSLDPKSVKGKIVVCERGVNSRAEKGQVVKKGGGVGMILTNGPFDGEGLVADCHVLPATSVGSAAGDEIRRYISLASPPTATIIFKGTRVGMMPAPKVASFSGRGPNPESAEILKPDVIAPGLNILGAWPNTVAPSGLASDSRRSDFNILSGTSMACPHVSGLGALLKAAHPDWSPAAIRSALVTTAYSVDKEGGPMVDESTGNVSSLFDYGAGHVDPQKAIHPGLIYDISTYDYVDFLCNSNYSTHNIRVITRKVAECSGAKRAGHAGNLNYPSLSAVFQQYGKHLMSTHFIRTVTNVGDPHSVYKVTIVPPPHTELTVEPDTLSFRRLGQKLNFLVSLQTMPVNLSPGSSTVRTGSIVWSDAKHTVTTPLLLTMHQPL 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03234 771 Pfam Fibronectin type-III domain 661 764 IPR041469 -
Cca03g03234 771 ProSiteProfiles Serine proteases, subtilase domain profile. 113 613 - -
Cca03g03234 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 26 771 - -
Cca03g03234 771 SUPERFAMILY PA domain 393 459 IPR046450 -
Cca03g03234 771 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Cca03g03234 771 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Cca03g03234 771 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Cca03g03234 771 Gene3D Peptidase S8/S53 domain 136 626 IPR036852 GO:0004252|GO:0006508
Cca03g03234 771 Pfam PA domain 386 460 IPR003137 -
Cca03g03234 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 109 IPR037045 -
Cca03g03234 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Cca03g03234 771 CDD Peptidases_S8_3 107 579 IPR034197 -
Cca03g03234 771 Pfam Peptidase inhibitor I9 37 109 IPR010259 -
Cca03g03234 771 Gene3D - 630 768 - -
Cca03g03234 771 CDD PA_subtilisin_like 351 474 - -
Cca03g03234 771 SUPERFAMILY Subtilisin-like 108 617 IPR036852 GO:0004252|GO:0006508
Cca03g03234 771 Pfam Subtilase family 134 595 IPR000209 GO:0006508|GO:0008236
Cca03g03234 771 Gene3D - 342 482 - -
Cca03g03234 771 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 26 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03234 Cca-Chr3 53691206 53693976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03234 37 771 Subtilisin-like Serine Gene Family AT3G14240 72.764 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03234 - - gmx:100784180 1271.53