Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03233 ATGTGGTGGAGATCGGCATCATTCATCATGGACAGACAGCAGAACGAAGCCGCTTTGAAGGGGGAATCTTCCCCAAACCCTAACCCTAACCCTAAGATCTCTGCCTACTATGAGACCAGAGCGGCGCATCACGGCGTCGTCACCAGCGACTGGCTGGCCCAGGCCCAGGCCGCGATtgggccggagcctgaccctgaaccccaacccaggcctgatcctgagAAGCCCTTCAGTGTCATCGACGAGTTTAACAATTGGCGGAAACAGCCCCATTTGGCGGAGGCGGTGGCGGCGATTCGCGCCTTGGCCGCGGTGATAAGGTGGAGCGAGGCTACGACGATGATGCAGCTGGAAATGGAGTTGAAGAAGGCATCCGATTCTCTCAAGTCTTGGGATGCGACCTCTATCTCTCTCACTGCGGGATGTGATCTCTTCCTGCGATACGTCACTCGGACTTCTGCTTTGGAATACGAAGACTTCAATTCCGCTAAATCTCGCTTGATTGAGCGCGCTGACAAGTTTGGGGAAATCTCCTACAAGGCCCGCAATGTTATTGCAATGTTGAGCCAGGATTTTATATTTGATGGATGTACAATTTTGGTTCATGGATTTTCCAGAGTTGTCTTGCAAGTCCTCAAACTTGCAGCGCACAATAACAAACTATTTCGGGTCTTTTGCACAGAGGGGAGACCTGACCGAACAGGATTGCGGTTGGCCAATGAGCTGGCCAAGCTTGACGTTCCtgtgaaacttctaatagattctgctgtcgcatatactatggatgaggtggacatggtttttgtgggtgcagatggagttgtcgaaagtgggggcataatcaacatgatggggacctaccaaattgcattggttgcacatagtatgaataaaccagtttatgtcgctgctgaaagttacaagTTTGCTCGTCTTTACCCTCTTGACCAAAAGGATTTAGCCCCTGCTATACGCCCTATTGATTTTGGCGTACCTATTCCATCCAAGGTTGAGGTTGAAAGATCCGCGCGGGACTACACCCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTGACTCCATCTGTTGTTAGTGATGAGCTCATCCAGCTATACCTATAG 1131 0.405 MWWRSASFIMDRQQNEAALKGESSPNPNPNPKISAYYETRAAHHGVVTSDWLAQAQAAIGPEPDPEPQPRPDPEKPFSVIDEFNNWRKQPHLAEAVAAIRALAAVIRWSEATTMMQLEMELKKASDSLKSWDATSISLTAGCDLFLRYVTRTSALEYEDFNSAKSRLIERADKFGEISYKARNVIAMLSQDFIFDGCTILVHGFSRVVLQVLKLAAHNNKLFRVFCTEGRPDRTGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPAIRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03233 376 SUPERFAMILY NagB/RpiA/CoA transferase-like 91 375 IPR037171 -
Cca03g03233 376 Coils Coil 114 134 - -
Cca03g03233 376 MobiDBLite consensus disorder prediction 59 78 - -
Cca03g03233 376 Pfam Initiation factor 2 subunit family 92 364 IPR000649 GO:0044237
Cca03g03233 376 Gene3D - 76 177 IPR042528 -
Cca03g03233 376 Gene3D - 179 376 IPR042529 -
Cca03g03233 376 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 32 376 - -
Cca03g03233 376 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 32 376 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03233 1 376 Eukaryotic Initiation Factors Gene Family AT1G53880 78.406 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03233 K03239 - gmx:100799015 662.529