Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03229 ATGAAGAGAGGTGGACTCAACGGTTTCGATTTGAGGAAGTCGGAGCGTTTGAGCTTGGACGGATTTGGAGTCCAAAGTTGCGATTATTACTTCGATTCGCACGAAAATCACATTAATCTGGCGTTCAAATGCATCTACAGGTACATCGCGTGCTTGTGGATCTTGTTTCTGCTTCTGCAAATGCAGCGCCTGGTCTTGGAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAACGTATAGAAGAAAGATTATCTGCTCTGAGAAATTGTATAGCATGTAATGACCATGTGGCTCTCACACACACTGATCTTGACAGGGTTCGCTTACACCTTCTTACTACAGTTATGAAGTGTTTTTTTAAGCGACCACCTGAAACTCAAAAAGCATTAGGAGTTGTTTTGGCTGCTGGTCTTGCTGATTTTCACCAGGTTTGA 450 0.4267 MKRGGLNGFDLRKSERLSLDGFGVQSCDYYFDSHENHINLAFKCIYRYIACLWILFLLLQMQRLVLEELQHLRNSLPDQVVVQRIEERLSALRNCIACNDHVALTHTDLDRVRLHLLTTVMKCFFKRPPETQKALGVVLAAGLADFHQV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03229 149 Pfam eIF-6 family 65 122 IPR002769 GO:0042256|GO:0043022
Cca03g03229 149 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 64 121 - -
Cca03g03229 149 Gene3D - 57 141 - -
Cca03g03229 149 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 64 121 IPR002769 GO:0042256|GO:0043022
Cca03g03229 149 SUPERFAMILY Pentein 64 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03229 Cca-Chr3 53662552 53665096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03229 67 121 Eukaryotic Initiation Factors Gene Family AT3G55620 72.727 5.07e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03229 K03264 - cpap:110815482 93.2041