Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g03208 | ATGGGTTTCCATGTTGAGGCACAGGCGAGGATGCACCAACCTTGCGCAGCTTGCAGGATGTTACGCCGTAGATGTGACAATAACTGCCTACTTGCTCCATATTTCCCGACTCAGGAGCTTCACAAATTTGTTGGGGTGCATAAAGTGTTCGGTGCTAGCAACGTTATCAAAATGATTCAGATGGTTGAGGAAAGAAAGAGAGAGGACGCTGTGAAAGCCATGGTTTACGAGGCGACAGCAAGGCTTAGAGACCCAGTTTATGGCAGTGCTGGGTCTATTTACCAGTTGCAAAAGATGATTCAGGAACTGAAAGCACAACTAGAGTCGATGAAAACTCAGGTATCAGAGCTGCGACAACAAAAAGAACTGTTGTTAAGTATTCATAACAACAATGTTCATAGCCACAATGATCCTTTATTCACCGACAATGACCCAATCTTTGATGGTTACTTTGATCAACTCATGGACTCAGATCCATTTGATTTTCCTGTACAAGTTGGCTGGGGATGTAGCAATACAAATAATATGTCAATGCCTTCCTGCTAG | 546 | 0.4359 | MGFHVEAQARMHQPCAACRMLRRRCDNNCLLAPYFPTQELHKFVGVHKVFGASNVIKMIQMVEERKREDAVKAMVYEATARLRDPVYGSAGSIYQLQKMIQELKAQLESMKTQVSELRQQKELLLSIHNNNVHSHNDPLFTDNDPIFDGYFDQLMDSDPFDFPVQVGWGCSNTNNMSMPSC | 181 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g03208 | 181 | ProSiteProfiles | LOB domain profile. | 13 | 114 | IPR004883 | - | |
Cca03g03208 | 181 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 1-LIKE | 6 | 157 | - | - | |
Cca03g03208 | 181 | Pfam | Lateral organ boundaries (LOB) domain | 14 | 111 | IPR004883 | - | |
Cca03g03208 | 181 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 6 | 157 | - | - | |
Cca03g03208 | 181 | Coils | Coil | 93 | 127 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g03208 | Cca-Chr3 | 53448352 | 53449227 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g03208 | 14 | 130 | AS2 family | AT2G28500 | 52.991 | 5.68e-42 | 139 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Cca03g03208 | LOB | 4.9e-38 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g03208 | - | - | ccaj:109796546 | 377.096 |