Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03181 ATGAGCAGCTACATTGACGATAAGCTCTGGATCATTGGTCTCGCAAACCAAAACCTTGCATGGGGCTTTGCCTTTTTCATGGCGGCCACACTCTGGCTGGCCATCACTTTCTTTTACTGGTGCCACCCGGGGGGTCCTGCCTGGGGGAAGTACTACTCCTACACCACCTACCCACCCATTCCCGGGCCTAAAGGGTGGCCTCTGATTGGGAGCATGGGTCTGATGGGGTCTCAGGCCCATCACCACATTGCTGCAGCCGCCACAGCATGCAGAGGGAAGCGCCTGATGGCCCTGAGCCTGGGGGAAACACGTGTCATCGTCACGTGCCATCCCGACGTGGCCAAGGAGATTCTCAACAGCTCGGCCTTCGGCGATCGCCCCGTCAAAGAGTCGGCCTACAGCCTCATGTTCAACCGCGCAATCGGTTTCGCCTCTTACGGAGTTTACTGGCGAACCCTCCGGAGAATCTCCGCCAACCACCTCTTCTGCCCCAGGCAAATCAAAGCCTCCCAACTCCAACGCTCTCAAATCGCCACCCAAATGCTTCACACCCTCACAAgcagccgcagccgcagccgcagccgcagccATCACCACCCCTTACGTGTCCGCCAACTCCTCAAAAAGGCCTCCCTATCTAACATGATGTGCTCCGTCTTTGGACAACACTATAACGATAGCCTCAACCAGGAAGAAGAGCTTGCAAGCTTAGTGGACCAGGGCTATCACTTGTTGGGCCTCTTCAATTGGGCCGACCACCTTCCTTTCCTTGCACATTTCGACCCTCAAAATATCCGCTTCAGCTGCTCCAACTTGGTCCCCAAGGTGAACCGCTTCGTCACCACAATCATCGCTCAACACCGAGCCACCAAAACCCAAACCAACCGTGATTTCGTTGACGTCTTGCTCTCTCTCCCTCAACCCGATCAATTATCCCACTCCGATATGATCGCTGTGCTTTGGGAAATGATATTTAGGGGAACCGACACGGTGGCGGTTTTGATCGAGTGGATACTGGCGAGGATGGTGCTTCATCCGGAGGTGCAGTCCAAAGTTCATGAGGAGCTGGATGCAGTTGTGGGGAGGTCACGCGCCGTGGCGGAGGATGACGTGGCAGCGATGACGTACCTGCAAGCGGTGGTGAAGGAAGTTCTGAGGCTGCACCCGCCGGGCCCACTTCTGTCTTGGGCCCGCTTGTCCATCTGTGATACGACGATTGATGGGTATCACGTGCCCGCGGGGACCACTGCTATGGTGAACATGTGGGCTATTTGCAGGGACCCACATGTGTGGGTGGATCCACTGGAATTTATGCCCCACAGGTTCCTCACTGCGGCTGAGTTCTCCATTCTGGGCTCGGATCTAAGGTTGGCCCCCTTCGGGTCGGGTAGGCGGGTGTGCCCCGGGAAGACGCTGGGGCTGGCTACGGTCTACTTTTGGGTGGCCTCGCTCTTGCACCACTTTCAATGGCTACCGTCTGATGACAAGGGAGTTGATCTCACGGAGGTGCTCAGGCTCTCTTCTGAAATGGCTAACCCTCTCACCGTCAAGCTGCGCCCCAGGCCATGA 1569 0.5539 MSSYIDDKLWIIGLANQNLAWGFAFFMAATLWLAITFFYWCHPGGPAWGKYYSYTTYPPIPGPKGWPLIGSMGLMGSQAHHHIAAAATACRGKRLMALSLGETRVIVTCHPDVAKEILNSSAFGDRPVKESAYSLMFNRAIGFASYGVYWRTLRRISANHLFCPRQIKASQLQRSQIATQMLHTLTSSRSRSRSRSHHHPLRVRQLLKKASLSNMMCSVFGQHYNDSLNQEEELASLVDQGYHLLGLFNWADHLPFLAHFDPQNIRFSCSNLVPKVNRFVTTIIAQHRATKTQTNRDFVDVLLSLPQPDQLSHSDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPEVQSKVHEELDAVVGRSRAVAEDDVAAMTYLQAVVKEVLRLHPPGPLLSWARLSICDTTIDGYHVPAGTTAMVNMWAICRDPHVWVDPLEFMPHRFLTAAEFSILGSDLRLAPFGSGRRVCPGKTLGLATVYFWVASLLHHFQWLPSDDKGVDLTEVLRLSSEMANPLTVKLRPRP 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03181 522 Gene3D Cytochrome P450 51 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PANTHER CYTOCHROME P450 78A6 12 521 - -
Cca03g03181 522 SUPERFAMILY Cytochrome P450 60 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03181 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Cca03g03181 522 PANTHER CYTOCHROME P450 78A7-RELATED 12 521 - -
Cca03g03181 522 Pfam Cytochrome P450 61 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03181 Cca-Chr3 53239301 53241180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03181 14 521 Cytochrome P450 AT2G46660 64.933 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03181 K20619 - gmx:100799906 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g03181 03 53239301 53241180 Cca03g03181 03 53239301 53241180 ECH