Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03175 ATGATTTGGATAGCAATTTCTATAGTTTCTCTTACTTACTTGTGTCTATGGATACTGATGAAAGAGAGAAACAGATTACCGCCCGGTCCAAAGGGGTTGCCAATTTTGGGGAGCCTTCACAAGTTGGGGGCAAATCCTTATCGTGATTTGCACCATCTAGCCCAAAAATATGGACCTGTCATGTATTTGCGCTTAGGTTTTATGCCCACAATTGTTGTTTCTTCATCACAGGCTGCTGAACTATTCCTCAAAACCCATGACCTTGTCTATTCTAGTAGACCACAACATCAAGCAGCAAAGTACGTTCTTTGGGATCAAAAGGACTTGGGTTTTGCTGAATATGGTTCTTACTGGCGCAACATGCGTAAAATGTGCACACTAGAATTGCTGAGCCAAACCAAAGTAAACTCCTACAGAAGCGTGAGGGGAGAGGAACTCAGTACATTGATCAAGCTTCTGAAAGAGGCAGCCAATGATGGAGTTGCTGTTGATGTCAGTTCCAAGGTTGTAGCACTCAATGCAGACATATCTTGTAGAATTGTTTTCGGAAAGAGGTACACGGACCAGGACTTGGGTGAGAAGGGTTTCAAGGCTGTCATGCAAGAGCTAATGCACTTACTCGCAACTCCTAACATAGGTGATTACATTCCTTATATTGGTGTACTTGACCTTCAAGGACTAGTCAAGCGTATGAAGGCACTTCGCAAAACATTTGATGTCTTCTTTGACAAAATTATTGATGAGCATATTCGATCAGAAAAGGGAGGAGACAAGGTGAAAGATTTTGTTGATGTCATGTTGAGCTTTCTTGGTAGTGAGGAATCTGAGTATCGCATTGAACGATCCAATATCAAAGCCTTAATGCTGGATATGTTGACTGGCTCATTGGATACTTCAGCTACATCAATAGAATGGACACTTTCAGAACTCCTTAGGAATCCAAGGGTGATGAAGAAAGTCCAGATGGAGTTGGAAACTGTGGTGGGTATGAAGAGGAAGGTGGAGGAATCAGACTTGGACAAGTTGGAGTATTTGAATATGGTTATAAAGGAAAGCATGAGGCTCCATCCAGTGGCACCGTTAATACCACGCTATTCAAGGGAAGATTGCATGGTTGGAGATTTTTTCATTCCCAAAGATTCAAGGGTCTTCATAAATGCATGGTCAATTATGAGAGACCCAAGTGTTTGGGATGAGGCAGAGAAATTCTGGCCAGAGCGATTTGAGGGAAGCAAAATTGATTTGAAAGGACATGACTTTGAGTTGATACCATTTGGAGCCGGCAGAAGGGGATGTCCAGGATTACAACTGGGCCTGACTATGGTTCTTCAAACAGTGGCACAACTGGTGCATTGTTTTGATTGGAAGCTGCCAAATGATATATTGCCATCTGATTTGGACATGACAGAGAAATTTGGTCTTGTAATGCCTAGGGTCAATCATCTACTTGCAATTCCATCATACCGCCTTCACGATCAAAGTGTTTAG 1488 0.4241 MIWIAISIVSLTYLCLWILMKERNRLPPGPKGLPILGSLHKLGANPYRDLHHLAQKYGPVMYLRLGFMPTIVVSSSQAAELFLKTHDLVYSSRPQHQAAKYVLWDQKDLGFAEYGSYWRNMRKMCTLELLSQTKVNSYRSVRGEELSTLIKLLKEAANDGVAVDVSSKVVALNADISCRIVFGKRYTDQDLGEKGFKAVMQELMHLLATPNIGDYIPYIGVLDLQGLVKRMKALRKTFDVFFDKIIDEHIRSEKGGDKVKDFVDVMLSFLGSEESEYRIERSNIKALMLDMLTGSLDTSATSIEWTLSELLRNPRVMKKVQMELETVVGMKRKVEESDLDKLEYLNMVIKESMRLHPVAPLIPRYSREDCMVGDFFIPKDSRVFINAWSIMRDPSVWDEAEKFWPERFEGSKIDLKGHDFELIPFGAGRRGCPGLQLGLTMVLQTVAQLVHCFDWKLPNDILPSDLDMTEKFGLVMPRVNHLLAIPSYRLHDQSV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03175 495 Gene3D Cytochrome P450 19 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 491 - -
Cca03g03175 495 Pfam Cytochrome P450 27 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PANTHER CYTOCHROME P450 93A3-LIKE 1 491 - -
Cca03g03175 495 SUPERFAMILY Cytochrome P450 27 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Cca03g03175 495 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g03175 495 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03175 Cca-Chr3 53169843 53171847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03175 34 490 Monolignol Biosynthesis Gene Families AT4G36220 40.421 4.67e-127 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03175 K20562 - gmx:100781617 785.793