LGRPv2

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca03g03083	ATGACTTCTTATTCTTCCCTCCCTTTCAACCAAAATGATTCCCAACAAATGCTCCTTTACCACCCTCAGCCTCAGGCTTCCTACAGAGGGGTCCGAAGGAGGCCGTGGGGGAAGTACGCCGCCGAGATAAGGGACTCCACCAGGAACGGAGTCAGGGTTTGGTTGGGAACCTTCGACACTGCCGAGGAAGCTGCTTTGGCCTACGACCAGGCTGCGCTGGCCATGCGAGGCTCCATGGCTGTCTTGAATTTTTCTGCTGAGACCGTTCGCCAGTCTCTTCGGAACATCGACTGTGCTTCTTTCCAACAAGGCTCCTCTCCCGTTCTCGAGTTGAAGAAGAGACATGCCATCAACAGAAAAACCCTAAAAAACAAGAACCTCAAACATCTCAATAATCTCATAGTGTTGGAGGACTTGGGGACTGACTATTTAGAACAACTTCTTACTCTCTCCTCCCAGGATATGGATATGGATATGAATGCTTCTTAG	489	0.499	MTSYSSLPFNQNDSQQMLLYHPQPQASYRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTAEEAALAYDQAALAMRGSMAVLNFSAETVRQSLRNIDCASFQQGSSPVLELKKRHAINRKTLKNKNLKHLNNLIVLEDLGTDYLEQLLTLSSQDMDMDMNAS	162

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cca03g03083	162	Pfam	AP2 domain	28	77	IPR001471	GO:0003700\|GO:0006355
Cca03g03083	162	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B	24	152	-	-
Cca03g03083	162	Gene3D	AP2/ERF domain	27	86	IPR036955	GO:0003700\|GO:0006355
Cca03g03083	162	PRINTS	Ethylene responsive element binding protein signature	28	39	IPR001471	GO:0003700\|GO:0006355
Cca03g03083	162	PRINTS	Ethylene responsive element binding protein signature	51	67	IPR001471	GO:0003700\|GO:0006355
Cca03g03083	162	SUPERFAMILY	DNA-binding domain	28	86	IPR016177	GO:0003677
Cca03g03083	162	SMART	rav1_2	27	91	IPR001471	GO:0003700\|GO:0006355
Cca03g03083	162	ProSiteProfiles	AP2/ERF domain profile.	27	85	IPR001471	GO:0003700\|GO:0006355
Cca03g03083	162	CDD	AP2	28	84	IPR001471	GO:0003700\|GO:0006355
Cca03g03083	162	PANTHER	DNA-BINDING DOMAIN	24	152	IPR044808	GO:0003700\|GO:0009873

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca03g03083	Cca-Chr3	52307826	52308362	Dispersed/Wgd

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca03g03083	7	148	AP2-EREBP Transcription Factor Family	AT3G23240	51.429	1.64e-57	177

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2 or ERF-ERF	Cca03g03083		AP2	2e-16	CL0081

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca03g03083	K14516		-	gmx:100787732	199.904

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Cca03g03083	03	52307826	52308362	Cca02g01608	02	34849302	34849790	ECH
Cca02g01023	02	26954291	26954926	Cca03g03083	03	52307826	52308362	ECH
Cca03g02200	03	42730758	42731399	Cca03g03083	03	52307826	52308362	ECH
Cca03g03083	03	52307826	52308362	Cca03g03083	03	52307826	52308362	ECH
Cca03g03083	03	52307826	52308362	Cca02g01024	02	26978087	26978695	PCT

Showing 1 to 5 of 5 entries