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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca03g03083
ATGACTTCTTATTCTTCCCTCCCTTTCAACCAAAATGATTCCCAACAAATGCTCCTTTACCACCCTCAGCCTCAGGCTTCCTACAGAGGGGTCCGAAGGAGGCCGTGGGGGAAGTACGCCGCCGAGATAAGGGACTCCACCAGGAACGGAGTCAGGGTTTGGTTGGGAACCTTCGACACTGCCGAGGAAGCTGCTTTGGCCTACGACCAGGCTGCGCTGGCCATGCGAGGCTCCATGGCTGTCTTGAATTTTTCTGCTGAGACCGTTCGCCAGTCTCTTCGGAACATCGACTGTGCTTCTTTCCAACAAGGCTCCTCTCCCGTTCTCGAGTTGAAGAAGAGACATGCCATCAACAGAAAAACCCTAAAAAACAAGAACCTCAAACATCTCAATAATCTCATAGTGTTGGAGGACTTGGGGACTGACTATTTAGAACAACTTCTTACTCTCTCCTCCCAGGATATGGATATGGATATGAATGCTTCTTAG
489
0.499
MTSYSSLPFNQNDSQQMLLYHPQPQASYRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTAEEAALAYDQAALAMRGSMAVLNFSAETVRQSLRNIDCASFQQGSSPVLELKKRHAINRKTLKNKNLKHLNNLIVLEDLGTDYLEQLLTLSSQDMDMDMNAS
162
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca03g03083
162
Pfam
AP2 domain
28
77
IPR001471
GO:0003700|GO:0006355
Cca03g03083
162
PANTHER
ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B
24
152
-
-
Cca03g03083
162
Gene3D
AP2/ERF domain
27
86
IPR036955
GO:0003700|GO:0006355
Cca03g03083
162
PRINTS
Ethylene responsive element binding protein signature
28
39
IPR001471
GO:0003700|GO:0006355
Cca03g03083
162
PRINTS
Ethylene responsive element binding protein signature
51
67
IPR001471
GO:0003700|GO:0006355
Cca03g03083
162
SUPERFAMILY
DNA-binding domain
28
86
IPR016177
GO:0003677
Cca03g03083
162
SMART
rav1_2
27
91
IPR001471
GO:0003700|GO:0006355
Cca03g03083
162
ProSiteProfiles
AP2/ERF domain profile.
27
85
IPR001471
GO:0003700|GO:0006355
Cca03g03083
162
CDD
AP2
28
84
IPR001471
GO:0003700|GO:0006355
Cca03g03083
162
PANTHER
DNA-BINDING DOMAIN
24
152
IPR044808
GO:0003700|GO:0009873
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca03g03083
Cca-Chr3
52307826
52308362
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca03g03083
7
148
AP2-EREBP Transcription Factor Family
AT3G23240
51.429
1.64e-57
177
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2 or ERF-ERF
Cca03g03083
AP2
2e-16
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca03g03083
K14516
-
gmx:100787732
199.904
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca03g03083
03
52307826
52308362
Cca02g01608
02
34849302
34849790
ECH
Cca02g01023
02
26954291
26954926
Cca03g03083
03
52307826
52308362
ECH
Cca03g02200
03
42730758
42731399
Cca03g03083
03
52307826
52308362
ECH
Cca03g03083
03
52307826
52308362
Cca03g03083
03
52307826
52308362
ECH
Cca03g03083
03
52307826
52308362
Cca02g01024
02
26978087
26978695
PCT
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