Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03064 ATGATCCTTGCTTTCTCCCTCTTGTGCGGTATTCTTGATTTCTCCCTTTACTCAGATCATTTGTGCTGCATTTATCAGGCATTTGTACCGGCTGATGACTTAAAAAGTGTTGAAAGAAGGTTACCTTTGACTGGAGAGAGCTTAGACTCTAGGGGCCTTTATATATATGATGATGGCTTCCGGTGCATTATATGGTTTGGTAGGATTTTGCAGCAGAATTATCAAAGACGCAGCGCAATGGATTGGGGTTTTGTGCATAAAACATGGGATAAGTGGGCTTCTACAAACATTGGTTATTCTGGTCATCCGTTAAAAGCTGCTTTGCTGATTAATTATGATCCCACTGGACCATCTCGATTGTTATCTACCATTGCCGAACAAGAAGGAATAAAAGCTAATCCCATTGAATTGAGTCACTTTGTGGACTTTGTCAAACAAAATAAACTCCAGACAGAGCTCTTCGTTATTGGGTCCAATCAGTACTTGGTCACGTCAATTCATGAGAACTGGTTTAGTGCAAGGTGTATAAACACATCAAAGCCTGCTGGTGAAGGTGCTATTGTTATACAAACAGCAGCATATATCTTAGTTGCTCTGTATGAAGGTTCCATTGGTCCGGCATCTCGTGCTATGGCAGCTGCTGATCAAATGTTGAGAACGTATCTGAATGCTTCCAAGAGAGCTTGTGAAGGTCACAGGTATGACCAGGATCAAAATATGGCTACAGCTAAGATTCCTCCACAAGTCTCTAAACCACAATCTCCTTATAAATTGTCCACAATAAAAAAGGCGAATTAG 798 0.4098 MILAFSLLCGILDFSLYSDHLCCIYQAFVPADDLKSVERRLPLTGESLDSRGLYIYDDGFRCIIWFGRILQQNYQRRSAMDWGFVHKTWDKWASTNIGYSGHPLKAALLINYDPTGPSRLLSTIAEQEGIKANPIELSHFVDFVKQNKLQTELFVIGSNQYLVTSIHENWFSARCINTSKPAGEGAIVIQTAAYILVALYEGSIGPASRAMAAADQMLRTYLNASKRACEGHRYDQDQNMATAKIPPQVSKPQSPYKLSTIKKAN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03064 265 Gene3D Severin 24 78 IPR029006 -
Cca03g03064 265 MobiDBLite consensus disorder prediction 240 265 - -
Cca03g03064 265 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 24 72 IPR036180 -
Cca03g03064 265 Gene3D Dynein light chain 2a, cytoplasmic 88 225 - -
Cca03g03064 265 MobiDBLite consensus disorder prediction 241 265 - -
Cca03g03064 265 Pfam Profilin 88 224 IPR005455 GO:0003779
Cca03g03064 265 PANTHER OS05G0241400 PROTEIN 80 221 - -
Cca03g03064 265 SUPERFAMILY Profilin (actin-binding protein) 89 217 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03064 Cca-Chr3 52080356 52086246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03064 77 217 Carbohydrate Esterase AT4G19410 69.718 5.13e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03064 - - gmx:100811973 275.789