Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03015 ATGGCTCGAGGTGCATCCGAACCTTCCATTCCACCCGTGTGGCATAGGGAGCTCCTAATGGCAAGGGATCCACCTCGCATTACATGCAACCATCCTGGATACGAAATGCAACTCCAAAACACCAAGGAAGGGACCATCACTTCATACGACAACAACAAGGTTCTTCGATCCTTCTTCTTTGGACCCACTCAGATAGCTGCCCTTCGTCGCTTGCTTCCCCATCACCTTCAGCATTGCTCCACATTTGATGTCATCGCAGCGTGCTTTTGGCTTTGCCGCACAAAAGCATTGCAAATAGAGGCACATGAGGACGTTCAAATTAAGTGTTCTGTCAATGCACGTGCTAGGTTCAATCCTCCGTTACCTGTTGGTTATTATGGTAACGCTGCTGCAACCCCCGCAGCAGTCACCACTGCAGGGAAGCTTTGTGAAAATCCATTTGGTTATGCTGTCGAGTTAATAAATAATGTGAAATGTGAGATCACAGAAGAGTATATGCATTCTCTGGCAGATTTAATTGCGATTAAGGGACGATACTCGTTGACAAATGAAAGGACGTCTTGTTTTGTTTCAGACTTAAGACGCTTTAGTTTTAGAAAAACTAATTTTGGGTGGGGCGATGCTGTGTATGGTGGACCGGCCAAGGGTGGGGGTGGGCTCTTAGCAACCACTCTTATCCCCTATAAGAATGCAAAAGGAGAAGAAGGTATATTATTACCAATTTGGTTACCCTTCGAAGCTATGAACATATTTGCCAAAGAACTGAACATGCTTCAGAACCAAAACCATCCTAATGGAAGTGGCCCTCATTTTGTCATGTCTAACATATAG 831 0.4513 MARGASEPSIPPVWHRELLMARDPPRITCNHPGYEMQLQNTKEGTITSYDNNKVLRSFFFGPTQIAALRRLLPHHLQHCSTFDVIAACFWLCRTKALQIEAHEDVQIKCSVNARARFNPPLPVGYYGNAAATPAAVTTAGKLCENPFGYAVELINNVKCEITEEYMHSLADLIAIKGRYSLTNERTSCFVSDLRRFSFRKTNFGWGDAVYGGPAKGGGGLLATTLIPYKNAKGEEGILLPIWLPFEAMNIFAKELNMLQNQNHPNGSGPHFVMSNI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03015 276 Pfam Transferase family 2 255 - -
Cca03g03015 276 PANTHER ALCOHOL ACYLTRANSFERASE 1 261 - -
Cca03g03015 276 Gene3D - 34 255 IPR023213 -
Cca03g03015 276 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03015 Cca-Chr3 51606681 51607511 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03015 1 255 Monolignol Biosynthesis Gene Families AT5G48930 25.926 6.00e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03015 K19861 - gmx:100792864 335.88