Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03014 ATGGCCTCATCATTACCCTCTCTGGTTGTAGTGAGGAGGTGCCAACCTGAGCTGGTAACTCCTGTTATACCCACTCCTAATGAACTTAAACCACTATCCGATTTAGATGATAGATACAGCTTGCGTGTCCACGTCCCAGTGATACAAATTTATCGTAACGAACCATTAATGGAACAGACAGACCCAGTTGAAGTGATTCGGAGGGCACTGGCAAAAACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGGGTCCTGGTCACAAATTGATGGTGGATTGTACAGGTGACACGTCTTAA 306 0.4575 MASSLPSLVVVRRCQPELVTPVIPTPNELKPLSDLDDRYSLRVHVPVIQIYRNEPLMEQTDPVEVIRRALAKTLVFYYPFAGRLREGPGHKLMVDCTGDTS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03014 101 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 99 - -
Cca03g03014 101 Pfam Transferase family 15 99 - -
Cca03g03014 101 PANTHER ALCOHOL ACYLTRANSFERASE 9 99 - -
Cca03g03014 101 Gene3D - 10 101 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03014 Cca-Chr3 51605358 51606592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03014 42 98 Monolignol Biosynthesis Gene Families AT5G48930 38.596 1.46e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03014 K19861 - ccaj:109791784 160.999