Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03005 ATGGCAAAGGTGGATCTCTCAAAGATTAGTCTCCGGCCATTCAAGATAAGTGACGTTGACGATTTCTTGTTATGGGCAGGGGATGATCGAGTGACTCGAAACCTCCGATGGAAGACGTGTGGTTCGAGGGAAGAGGCTCTGACCTTCATAAGGGACGTTTGCATACCTCACCCTTGGCGTCGCTCAATCTGTCTCCATCACCGTTCCATAGGCTTTGTTTCGGTTTATCCATGGTCAGGTGATGATAGCTGCAAGGCTGATATAGGCTATGCTATTGCCACCAACTACTGGGGCCAAGGAATAGCCACCAAAACTCTCAAAATGGCAGTGCCTCAAGTGTTTAAGGACCTACCCCATTTGCTAAGGCTCCAGGCTTTTGTTGATGTTGAGAATAGGGCTTCTCAAAGGGTGTTGGAAAAAGCTGGATTCCTTAGAGAGGGTGTCCTCAGAAAGTTCACTTATCTTAAAGGGGTTGTTAAGGATCTTGTACTGTTTAGTTTTTTGTCAACTGATGAAATTAGTTCCGAAAATATTTGA 537 0.4544 MAKVDLSKISLRPFKISDVDDFLLWAGDDRVTRNLRWKTCGSREEALTFIRDVCIPHPWRRSICLHHRSIGFVSVYPWSGDDSCKADIGYAIATNYWGQGIATKTLKMAVPQVFKDLPHLLRLQAFVDVENRASQRVLEKAGFLREGVLRKFTYLKGVVKDLVLFSFLSTDEISSENI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03005 178 Gene3D - 4 168 - -
Cca03g03005 178 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 4 174 - -
Cca03g03005 178 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 174 - -
Cca03g03005 178 Pfam Acetyltransferase (GNAT) domain 9 143 IPR000182 GO:0016407
Cca03g03005 178 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 169 IPR000182 GO:0016407
Cca03g03005 178 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 168 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03005 Cca-Chr3 51518934 51519614 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca03g03005 Acetyltransf_3 1.1e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03005 - - gmx:100527210 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g03005 03 51518934 51519614 Cca03g03005 03 51518934 51519614 ECH