Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02986 ATGGAGTGCAACAAGGATGAAGCTATGAGGGCTAAGCAGATTGCTGAAAATAAGATGCAAGCTGGTGACTTTGAAGGGGCGCTGAAATTTGCTACGAAAGCCCAGAGGCTGTTTCCTGATATTCAGAACATTGTTCAGATCATTACAGTTTGTGAGGTTCACTGTGCTGCACAGAAAAAACACTCTGGGTCTGACATGGACTGGTATGGAATTCTTCAGACAGATCGGATAGTTGATGAAGCAACAATAAAGAAACAGTATAGAAAGCTTGCACTGCTACTTCATCCTGATAAAAATAAATCTGCTGGTGCAGAGGCTGCTTTCAAGTTGATTGGTGAAGCTAACAGAGTATTGAGCGACAGAACGAAGCGTACTTTGTATGACTCAAAGCTTGGAGTTTCTTTGGGAAATACAGCTCCTAAGGTTCCACCTCGTAATCCAAATGGGAATTCTTTTGGGGCAAAATATGATGGAACTACAAGAAATCATCATAACAATTTTTATTCACAAAACAATGCTTGGAATGCATATCATCGGGTTGAAAGTCAGACATTCTGGACATGTTGCCCATATTGTAATACTAGATATCAATACTACAAATTCATTTTAAATCAGACCATACGCTGTCAACAACAACAATGTTCTAAATCCTTTACAGCTCATGATATGGGGAACCACAATGTGCCACCAGGATATGGGTCACCTAATAACCAGAAAGAGCCTCCAAAACATGCACCATCAAAAGAAGCATCAAAAAGAAATGGTGGCAAATCTTGTAGTAGGAAACAGGAGGGTGTATCCATGTCAAAATGTACTGCTGGAGTTGGTGCCAGTTCTAAATTTGCAAAGAGCAGAGATGCCCATGTGGCTGCAGGAGTGGCAAAGGCTGGTGTTGGAACATCCAACCCCACTAATTCCAAAGCCAAGGAATCACAAACCTCAACAAAAATTGGATGTAAGAGAGCAAGGCAGTCAGCAGCATCAGATGATTATAACAAAACTGGAAATGGTAAAGGCATGAAAGATACCAAGGTTCAAGAAAATAGGGTTGATTCTCATAGGAGATCTTCTAGGAAAAAACAGCATGTTTCGTACACAGAAGCTGATAAAGATGGTGATGTTGGGATTTCTCCCAAAAGGCCAAGACATCATGAATCCTTTACCTCCACGGAAATGAAGAAAAGAGAAGTGCCCACAACTGGTGGGTTGTTTGGTAACAATAATCCAGCCTCTTTTACTGCTGGTGTGGGTGGTCAGAATGATAGAAAGGAGGCATCCAATTCAGATCTTAACGATAGAAAGTCAAAAACTGACAATTGTTCTCCACTGAAGTCAAATTTATCTCCCAGTTCAGAAATTTGCTGTCCTGATCCAGATTTCAGTGATTTTGAGAGAGATAAGGCAGAGGATTGTTTTGCTGTTAATCAATTGTGGGCTATTTTTGATAATGACGATAGTATGCCAAGATTCTATGCTTTTGTCAAGAAAGTGTACTCCCCTTTCAAATTGCAGATTACTTGGCTGGAACCTGACTCAGATGACCAAGGTGAGATTGACTGGCATGAAGCAGGTTTGCCTGTTGCTTGTGGTAAGTTTAAACTTGGTCATTCTCAGAGAACTACAGATCGTTTTATGTTCTCTCATCTGATGCATAGCATAAAAGGAAGTGACGCTGGTACTTATCTTGTATATCCAAAAAAGGGAGAAACTTGGGCAGTTTTCAGACATTGGGATATTGGATGGAGTTCTAATCCAGAAAAGCATTCAGAGTATCAATTTGAATATGTGGAAGTTCTATCTGATTTTGCTGAAAATGTTGGCATTGAAGTTGCTTATCTTGGCAAACTGAAAGGGTTTGTCAGTCTCTTTCAGCGAACTGTGCTGAATGGAATTAGCTTATTTTGTATTCCGCCTAATGAGCTATATAGGTTCTCACATCGAGTTCCTTCATATAAGATGACAGGTGCTGAAAGGGAAGATGTTCCAAAAGGATCTTTTGAACTCGATCCTGCTGGTCTGCCTAATAGTCTTTTTGAAGTTGGTGATCCTGGTGTTGTGAAGATAGATGGAGTCAATTGTTCGAACAATGAATACTTGAAGTGTAAAGTTGAACAGCCAACGTCTAGTGATAGTATTCACAAAGCAAAGTTGCGAGAAAGTAATGATGATGAAAGAATCTCACAAATCCTCAGAAGATCACCAAGGTCAAGCCAAAAAGGTATGAACAATGGTCAAGCAAGCACTAGCCACAGGGACACCTCAGAGGGAGACACTGTCGTATCTCAGACCAATGAGAAGAAAGTCGAGATACCTCAGAAACATGAGAAAAATAATTGTGTAGAAGAGACATTGAAAGCTCGAAAGTCACCTAGAGATTTAAGCAAGAAAAATGTTAAAGGAGATGCAGGTGAATGGACGACAGGCAAGATGACTGATAATCATTCAAATAACAGCAAAAATGTGAAGGACAGGAGTTTTCCTCAGTCGGTGGGAGCTTCGAGTTATGACTTTAAGAAGGAAAAATCTGAAGAGATGTTTCAGTGTGGTCAGATATGGGCAATATATGGTGACAGGGATAATATGCCAAATACATATGCACAAATTAAGAAGATTGAATTCACTCCTAATTTTAGATTGCAGGTGTCTGTGCTTGAACCCTGCTCACCATCAAATGACTTAAAAAGAACAATATCTTGTGGTTCTTTTAAAGTTAAAGCAAAATTGCAGATTCTTTCTATCTCTGCATTCTCTCATCAATTAAAAGTCGAACCCTTGGTAAATAGTAGATATGAAATTTACCCTAGAAAAGGTGAGATTTGGGCTCTACACAAGGACCAGAAGTGTGAACTGACTTCAAATCAGGGCAGAGATGAATGTCATATAGTAGAAGTATTAGCAGATAGTGACAAAAGTATACAAGTTGTTGTTCTGATGCCGTATAGCAACTCTCAGACAATTTTCAAGGCTCCTAGAATTCAGAGATCTAAAACTGGTGTAATTGAAATATTAAGAGAAGAGGTTGGCAGATTTTCACATCAGATTCCTGCATTTCAGCACAGTGGGGAAGACAATGTTCATCTCAGAGGGTGTTGGGAGCTTGATCCTTCTTCAGTTCCTGGTTGTCTCATACCAATAGACTGA 3141 0.3973 MECNKDEAMRAKQIAENKMQAGDFEGALKFATKAQRLFPDIQNIVQIITVCEVHCAAQKKHSGSDMDWYGILQTDRIVDEATIKKQYRKLALLLHPDKNKSAGAEAAFKLIGEANRVLSDRTKRTLYDSKLGVSLGNTAPKVPPRNPNGNSFGAKYDGTTRNHHNNFYSQNNAWNAYHRVESQTFWTCCPYCNTRYQYYKFILNQTIRCQQQQCSKSFTAHDMGNHNVPPGYGSPNNQKEPPKHAPSKEASKRNGGKSCSRKQEGVSMSKCTAGVGASSKFAKSRDAHVAAGVAKAGVGTSNPTNSKAKESQTSTKIGCKRARQSAASDDYNKTGNGKGMKDTKVQENRVDSHRRSSRKKQHVSYTEADKDGDVGISPKRPRHHESFTSTEMKKREVPTTGGLFGNNNPASFTAGVGGQNDRKEASNSDLNDRKSKTDNCSPLKSNLSPSSEICCPDPDFSDFERDKAEDCFAVNQLWAIFDNDDSMPRFYAFVKKVYSPFKLQITWLEPDSDDQGEIDWHEAGLPVACGKFKLGHSQRTTDRFMFSHLMHSIKGSDAGTYLVYPKKGETWAVFRHWDIGWSSNPEKHSEYQFEYVEVLSDFAENVGIEVAYLGKLKGFVSLFQRTVLNGISLFCIPPNELYRFSHRVPSYKMTGAEREDVPKGSFELDPAGLPNSLFEVGDPGVVKIDGVNCSNNEYLKCKVEQPTSSDSIHKAKLRESNDDERISQILRRSPRSSQKGMNNGQASTSHRDTSEGDTVVSQTNEKKVEIPQKHEKNNCVEETLKARKSPRDLSKKNVKGDAGEWTTGKMTDNHSNNSKNVKDRSFPQSVGASSYDFKKEKSEEMFQCGQIWAIYGDRDNMPNTYAQIKKIEFTPNFRLQVSVLEPCSPSNDLKRTISCGSFKVKAKLQILSISAFSHQLKVEPLVNSRYEIYPRKGEIWALHKDQKCELTSNQGRDECHIVEVLADSDKSIQVVVLMPYSNSQTIFKAPRIQRSKTGVIEILREEVGRFSHQIPAFQHSGEDNVHLRGCWELDPSSVPGCLIPID 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02986 1046 MobiDBLite consensus disorder prediction 401 424 - -
Cca03g02986 1046 Pfam DnaJ domain 67 128 IPR001623 -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 731 766 - -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 361 392 - -
Cca03g02986 1046 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Cca03g02986 1046 SMART dnaj_3 66 123 IPR001623 -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 335 354 - -
Cca03g02986 1046 CDD DnaJ 67 120 IPR001623 -
Cca03g02986 1046 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 709 1042 - -
Cca03g02986 1046 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 686 - -
Cca03g02986 1046 PRINTS DnaJ domain signature 69 87 IPR001623 -
Cca03g02986 1046 PRINTS DnaJ domain signature 87 102 IPR001623 -
Cca03g02986 1046 PRINTS DnaJ domain signature 103 123 IPR001623 -
Cca03g02986 1046 PANTHER - 1 686 - -
Cca03g02986 1046 PANTHER - 709 1042 - -
Cca03g02986 1046 Pfam Domain of unknown function (DUF3444) 451 657 IPR024593 -
Cca03g02986 1046 Pfam Domain of unknown function (DUF3444) 833 1022 IPR024593 -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 709 730 - -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 298 321 - -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 808 830 - -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 425 439 - -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 709 830 - -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 767 799 - -
Cca03g02986 1046 SUPERFAMILY Chaperone J-domain 64 131 IPR036869 -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 242 259 - -
Cca03g02986 1046 Gene3D DnaJ domain 52 140 IPR036869 -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 220 263 - -
Cca03g02986 1046 MobiDBLite consensus disorder prediction 296 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02986 Cca-Chr3 51305431 51310810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02986 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.034 2.98e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02986 - - gmx:100782762 1665.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02986 03 51305431 51310810 Cca03g02986 03 51305431 51310810 ECH
Cca03g02986 03 51305431 51310810 Cca02g01525 02 33822198 33824313 PCT