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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca03g02960
ATGTTAAAGCAAGGAACGCGGAAATGGCGTGATGCTTGTGATGGCGGAAGCAGAGAGGGAGAAAGGAAGAGAGGAATGGCAGTGGCATCAATGATTCACTCACTCTCACTCATCTTCACAATCACCCTCGTTCTCATATTCTTCTTCACCGTAAACCCTCCCTCTGCAGCACGTAGGTCACTGGTCGCAATCGCATCCTGCTCCAACGAATCCAGCAATGGCCTCCTCAACTACCACTGCCTCTTCCCACAAAGCTCCACCCTCTCAATCCccaccctcatcctcttcctcctcctccacttctacatcctcatcaccaccgcgcagcgccacttctccctcgtcaccaccaagctcgcctcccacctcagcctctcccccagcatggccgccgtcacgctcctctccctcggcaacggcgcccccgacgtcTTCGCCTCCCTCGCCGCCCTCCGCGCCGGCCACTACCGCACTGGCCTCGCCGCCATCCTCTCCGCCGGCACCTTCGTCTCCGCCCTCGTCGTCGGCTTCGTCGCCATCTACGCCGCTCCCTTCGCCGTCGATCCCGCCCCCTTCGTCAGAGACCTCCTCTTCTACCTCACCGCCGCCTTCTTCCTCTTCTACGTCTACCTCTCCGCCGAGATTTTCCTCTGGCAGGCCATCGGAttcgtcgccttctacttcttcttcgtcgctttcgtcttctACATGGATTTCGGATTGCCCAATCGCAGCGTCAACACTTCCGCGGATCTCGAGGGACACGTGCAACCAGATTCCGACGTTAAACCTTCCGGATCTCGCGACGGAGACAAACGCGCTTCTGGACTGCGCGCTGCTTTTCGTTTGATTTCTAAAACATGGGAGCTTCCTGTCTCAACTCTCTTAAGGTTGACAATCCCTCAACCAGCACCATCACAATGGAACAGATTTTATGCATCAGCCAATGTTGCACTTTGTCCACTAGCCCTCTTGTATGCCTGCAACTCATTCGTGCCATTTGATCATCCCATAGTTTTCCTCCTCCCCAACACTCTCTTCCCCCTCTGGTCAGTAGTGCTCATGACAAGTTTCTCTCTTGCATTTCTTCATTATGTAATGGAAAAAGAACCCCCCAAAACAGAGCATCTACCCGTGGTCGTTGTGGCATTTATTATGAGCGTGTTTTGGATATCTACTACAGCTGGAGAGCTGGTGAACTGCCTGGAAGCTATAGGCACACTTCTCAAACTGCCGCCAGCACTCCTGGGTCTTACGGTGCTGGCGTGGGGAAATTCAGTGGGAGATCTTGTTGCTGATGTCGCAGTTGCTAAAGCCGGTCATCCGGCGATGGCAATGGCCGGATGCTTTGCAGGACCAATGTTTAACATGCTTGTTGGCCTCGGAAGTGCTTTGGTGATACAGACAGCCAATATATATCCTAGTGCCTATAAGCTAAATTTCCACGTTGGTATCGTGATCGCATTTGTATTTCTGCTTTCAAGCCTTATGGGGTCTCTCTTGGTGATCACTTGGTGCAGATTCAGAGTGCCTAGGTTTTGGGGATTCTGTCTGGTGGGTATCTATGTCGCATTCATGGCAGCGAGTTTAGTAATAGCCATGTTTTCGGGATGA
1614
0.456
MLKQGTRKWRDACDGGSREGERKRGMAVASMIHSLSLIFTITLVLIFFFTVNPPSAARRSLVAIASCSNESSNGLLNYHCLFPQSSTLSIPTLILFLLLHFYILITTAQRHFSLVTTKLASHLSLSPSMAAVTLLSLGNGAPDVFASLAALRAGHYRTGLAAILSAGTFVSALVVGFVAIYAAPFAVDPAPFVRDLLFYLTAAFFLFYVYLSAEIFLWQAIGFVAFYFFFVAFVFYMDFGLPNRSVNTSADLEGHVQPDSDVKPSGSRDGDKRASGLRAAFRLISKTWELPVSTLLRLTIPQPAPSQWNRFYASANVALCPLALLYACNSFVPFDHPIVFLLPNTLFPLWSVVLMTSFSLAFLHYVMEKEPPKTEHLPVVVVAFIMSVFWISTTAGELVNCLEAIGTLLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTANIYPSAYKLNFHVGIVIAFVFLLSSLMGSLLVITWCRFRVPRFWGFCLVGIYVAFMAASLVIAMFSG
537
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca03g02960
537
Pfam
Sodium/calcium exchanger protein
380
530
IPR004837
GO:0016021|GO:0055085
Cca03g02960
537
Pfam
Sodium/calcium exchanger protein
95
235
IPR004837
GO:0016021|GO:0055085
Cca03g02960
537
Gene3D
-
125
250
IPR044880
-
Cca03g02960
537
Gene3D
-
313
531
IPR044880
-
Cca03g02960
537
MobiDBLite
consensus disorder prediction
1
20
-
-
Cca03g02960
537
PANTHER
MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN
281
536
-
-
Cca03g02960
537
PANTHER
MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN
68
244
-
-
Cca03g02960
537
PANTHER
NA+/CA2+ K+ INDEPENDENT EXCHANGER
281
536
-
-
Cca03g02960
537
PANTHER
NA+/CA2+ K+ INDEPENDENT EXCHANGER
68
244
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca03g02960
Cca-Chr3
50997072
51000038
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca03g02960
29
536
Antiporters
AT1G08960
65.185
0.0
629
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca03g02960
K13754
-
gmx:100775437
785.023
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