Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02947 ATGGATGATCAAATAATCGAGATGCTCACAGAAAAGTTCAATCGATTCGTTATTCACTGTAATTCGAAGCCGTCCTCAGATTCACAGACAAGCGTAGCAGATTGTGAGATAGATAATGCATTAGCAGAACTGAACAATGAGACCTTTGACAAAATGGATGAGAATAGCATCTCCAATGGAATTGATGAATGTTCTCCTGATAAGGGTCATACACTCCCAATATTGAAGAAAATCCTTGACTTGAGTACCAAAGTTCAGAATTTGAAGAAACAACATGTGGCCCTATCTGATCAAGTGAAACTCACAACTGAGTCATTTCCAGGCCAAGATGTTTTAAAGTCTGTTCAGTTTCTTGGTGCTAAATATGAAGTTTTGAAAAGAAAGTACTTGAAGGAATCATCTGAGCGTAGACAGCTATACAATGAAGTGATTGAACTAAAGGGGAATATCCGAGTTTTCTGCAGATGCAGACCATTAAATGAAAGTGAAATTGCAAATGGATCAGCAGTATCTGTTGTCAATTTTGATTCATCTCCTGATGAGCTCCAAGTTAATTGCACTGATTCTTCTAAAAAGCAGTTTAAATTTGATTATGTGTTCAGACCTGAAGATAACCAAGAGACTGTTTTTGAACAAACAAAACCTATCGTCACATCTGTATTAGATGGATACAATGTTTGCATTTTTGCATATGGTCAAACTGGAACTGGCAAGACTTTTACTATGGAGGGAACACCAGAGCATAGGGGAGTTAACTATAAAACCCTGGAGGAATTATTTCGTATATCTGAAGAGAGACAAGGCATGATAAAATATGAATTGCTTGTTAGCATGTTGGAGGTTTACAATGAGAAGATAAGAGATTTATTGGTGGAAAATTCAGTTGAACCTATAAAGAAGTTGGAGATAAAGCAAGCAGCAGATGGAACCCAAGAAGTCCCTGGACTTGTTGAAGCCCGTGTTTATGGAACAGAGGATGTCTGGGAAAAGCTTAAGTCTGGAAACCGAGTCAGATCTGTTGGATCCACTAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGTTGCGAGTGACTGTTCTGGGGGAGAATTTAATCAATGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGAGTGGGAAAAACTGAAGCTGAAGGAGAAAGACTAAAGGAATCTCAATTCATAAACAAGTCTCTATCAGCACTTGGTGATGTTATTTCGGCCCTAGCATCCAAATCAGCCCACATACCTTACAGGAACTCAAAGCTTACACATATGCTCCAGAGCTCTTTAGGGGGTGATTGCAAAACTTTAATGTTTGTCCAGATAAGTCCAAGTGCAGTAGACTTAACAGAGACACTTTGTTCTCTGAATTTTGCTACGCGTGTTCGAGGAATTGAGAGTGGTCCAGCTCGCAAGCAAACAGACCATACTGAACTGTACAAGTACAAGCAAATGGCAGAAAAACTCAAACACGATGAGAAGGAAACTAGGAAATTACAAGATAACGTACAAACATTGCAAATGAGACTTGCTACAAGAGAACTCATGTGCAGAAATCTTCAAGAAAAGGTTCGGGATCTTGAGAACCAGATAGCAGAGGAGAGAAAAATCAGACTGAAACAAGAAAGTAGATTGTTTGCTTCTGTTTCAGCTCCACCTTCAACAGTGTCAGAGTCAACGATAAATCACCCAGTTGCCCAGAAAACTATAAACAAGCCGCCACTAAATCCTTCAAAAAGACAGCCACTGAGAAAAATTACTAACTTCTTGCCTCCACCACCTGAGAGAAGGCCCTCATGCAGCTCTTCCATAGATGCAAAGGAAAACATTGTCAGAACGTCTACAGCAAATACACAAGGCCTTTTTAAAGCAAGAAGAAGGGTATCCATTGCTGCAAGACCCCCAGGCGCATCAATGACACCATCAACAACAAAGACCCTTCTTCAACCTAGAAGGCGAGTTTCTGTAGCTACAATTTGTCCTGTCACAACTTCTAATATGACAGCTCCACTCCGTTCCCCCACTCAGCAATCACTGATAAGGAACCAAAGGAAAAATCGGTATTCAAGGTTGTTTACCTCATTGCCAGAAACGAGGACCTCAGTTGAGACATCACCAACTTTAATGAGGAGCAATAGTATGTTTGTGGGCAGTCCAACACTGGCAGATTCGCAGATGGCTAGGCATTCAACTGTGGTTGCATTGCAACGCAAACCTTTGGTGTGGACTCCTCTTAAGCAGAAAGGCCTGAAAAATAGCAGCAGAAAGTCATTGTTGGTGAAGCCAGCTCAGCCCTTCTACTGA 2328 0.4102 MDDQIIEMLTEKFNRFVIHCNSKPSSDSQTSVADCEIDNALAELNNETFDKMDENSISNGIDECSPDKGHTLPILKKILDLSTKVQNLKKQHVALSDQVKLTTESFPGQDVLKSVQFLGAKYEVLKRKYLKESSERRQLYNEVIELKGNIRVFCRCRPLNESEIANGSAVSVVNFDSSPDELQVNCTDSSKKQFKFDYVFRPEDNQETVFEQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYKTLEELFRISEERQGMIKYELLVSMLEVYNEKIRDLLVENSVEPIKKLEIKQAADGTQEVPGLVEARVYGTEDVWEKLKSGNRVRSVGSTSANELSSRSHCLLRVTVLGENLINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHMLQSSLGGDCKTLMFVQISPSAVDLTETLCSLNFATRVRGIESGPARKQTDHTELYKYKQMAEKLKHDEKETRKLQDNVQTLQMRLATRELMCRNLQEKVRDLENQIAEERKIRLKQESRLFASVSAPPSTVSESTINHPVAQKTINKPPLNPSKRQPLRKITNFLPPPPERRPSCSSSIDAKENIVRTSTANTQGLFKARRRVSIAARPPGASMTPSTTKTLLQPRRRVSVATICPVTTSNMTAPLRSPTQQSLIRNQRKNRYSRLFTSLPETRTSVETSPTLMRSNSMFVGSPTLADSQMARHSTVVALQRKPLVWTPLKQKGLKNSSRKSLLVKPAQPFY 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02947 775 MobiDBLite consensus disorder prediction 576 610 - -
Cca03g02947 775 ProSitePatterns Kinesin motor domain signature. 373 384 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca03g02947 775 PANTHER KINESIN-LIKE PROTEIN KIN-14S 85 767 - -
Cca03g02947 775 SMART kinesin_4 147 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02947 775 Gene3D Kinesin motor domain 144 516 IPR036961 -
Cca03g02947 775 ProSiteProfiles Kinesin motor domain profile. 149 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02947 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 509 IPR027417 -
Cca03g02947 775 PANTHER KINESIN-RELATED 85 767 IPR027640 GO:0003777|GO:0007018
Cca03g02947 775 Coils Coil 490 552 - -
Cca03g02947 775 Pfam Kinesin motor domain 155 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02947 775 Coils Coil 78 98 - -
Cca03g02947 775 CDD KISc_C_terminal 147 474 - -
Cca03g02947 775 PRINTS Kinesin heavy chain signature 223 244 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02947 775 PRINTS Kinesin heavy chain signature 343 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02947 775 PRINTS Kinesin heavy chain signature 374 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02947 775 PRINTS Kinesin heavy chain signature 423 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02947 Cca-Chr3 50909372 50914033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02947 119 498 Calmodulin-binding Proteins AT5G65930 42.408 3.58e-78 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02947 K10406 - gmx:100808603 1095.88