Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02915 ATGGTTAAGGGACGGCAAGGAGAGCGTGTCAGGCTTTACGTGAGGGGTTCAATTCTTGGATACAAGAGGTCCAAGTCAAATCAATACCCGAATACCTCTTTAATCCAGATTGAGGGAGTCAACTCCAAGGAAGAGGTAGGTTATTACTGCGGGAAGCGCATGGCTTACATTTACAAAGCCAAGTCCGTGCTAAGTTCAAGTCCAATTTGCCACCCAGATCAATGGGAGCGAGGGTTAGAGTCTTTATGTACCCAAGCAATATATGAGGACCTGTGGGCCTTGTTTGACTCGGAACTTGAAGGAATTTGCATTAATGGAAGTATCCTGGAACTAATCCACCCACCTGAGAAAGAAAATGACTTGTCACGTGACCCAAAAGCAATATCACGTGTCAACCCCTCGAGTACGCATACGCTGAGCAATCCTTATCAAAACGCGAACGCCGATCCACGTGTCCACGTCACTGGATCCAACGCAGGGTTCAGATCTCTCCTGAGCCCATGA 504 0.4762 MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNSKEEVGYYCGKRMAYIYKAKSVLSSSPICHPDQWERGLESLCTQAIYEDLWALFDSELEGICINGSILELIHPPEKENDLSRDPKAISRVNPSSTHTLSNPYQNANADPRVHVTGSNAGFRSLLSP 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02915 167 SUPERFAMILY Translation proteins 12 62 IPR009000 -
Cca03g02915 167 Pfam Ribosomal protein L35Ae 12 63 IPR001780 GO:0003735|GO:0005840|GO:0006412
Cca03g02915 167 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 62 IPR001780 GO:0003735|GO:0005840|GO:0006412
Cca03g02915 167 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 62 - -
Cca03g02915 167 MobiDBLite consensus disorder prediction 118 152 - -
Cca03g02915 167 Gene3D translation elongation factor selb, chain A, domain 4 6 82 IPR038661 -
Cca03g02915 167 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02915 Cca-Chr3 50537559 50542190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02915 1 62 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 87.097 9.47e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02915 K02917 - tcc:18597616 123.25