Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02900 ATGGCGGATACGTTACCTGCATGTTATAAGGTTTATGTGACTAATCCTAATCGAATCTGGCAAACTGATAACGTCTTAAAAAAGGAGCTTCCCACTCTCGCTTTTCAAATTGCCTTTACCGTTTTGCTGTCTCGTCTTTTCTACCTTATCTACAAACCTTTCCGTCAAACTCGTCTTATTGCACAAATATCTGTTGGTTTCCTACTAACTCGACCATTACTTGGGAGATCCGCAGCAGTTTTTGAGTTCATATTTCCTGTAAACGGAGTCCTTAATATCGAAGTCTTGGCACACATTGGTCTCATATTCTATGCATTCCTCAGTGGTTTGGAGATGAACTTAAACAACATTCTACAAGTAAAAAAGAAAGCCGCAAGCATCGCAATTGCGGGGATCATATTCCCCATGGTGATGGCACCGGCCTTGTATGTTCTACTTCGAAAATTTTACGGCAAAAATGATGTAAATATACACCTTGAAGAAAGTACAAGTAGTGCTTTTTTAATTTGGAGCGTGGTTCTCACCGTTACAGGTTTTCCTGTCTTGGCTCACACACTTTCTGAGCTCAAGCTCCTTTACACTGGTCTTGGCAAAGCAGCTTTAACAGCAGCCATGATCGGTGAGACCTATGGTTGGATTCTTTTCACTTTAGTGGTTCCATTTGCAATCAATGGTGAAAAAGCTGTGTACTCGGTGCTAAGCACGACATTGTTCATTGTTGTTTGCGTATTTGTGGTACGTCCAATCCTTGCAAGGATCATTGATCGCAAGACAGAAAAGGATGAGTGGGATGATAACCAATTAATCTTTGTGGTGATGGGAGTTCTTGCTTGTTCATACATTACAGATATTCTTGGCGCACATGGCATTGTGGGGGCTTTTGTATATGGATTGATTTTACCTCATGGTAGATTTGCAGATCATCTCATGTCCATTTTAGATGATTTTGCTGGCGGGTTTCTAGCGCCACTCTTCTTTGGTGGCACTGGAATGAGACTTATGTTGGCCACTATTTTCCTCGAAGGACATTGGCCCATGACACTGCTTGTTATACTCTTGTTGTGTACTCTAAAGATTTTAAGCACTATATTCGTCACTTTCTTCTTTGGTATGCGCACTCAAGACGGTTTAGCCCTAGGCTTGCTTCTCAATACCAAGGGCGCCATGGCACTCATAATGCTAAACATTGCTTGGGATAGATCGATTTTTTCTGTACCTACCTATGCTGTTGTTACTTCAGCTGTTCTTCTAATGACTGTAGCAGTGTCTCCTATCATCAATGCTGTGTACAGACCGAGAAAGAGATTTGAGCAGAACAAGCTGAAGACAATACAGAAACTAAGACTTGATGCAGAGCTTCGAATTCTAGCATGTGTCCACAATACTCGCCAAGCCACAGGCATGATCAGCATAATTGAATCTCTCAATGCGACCAGACTTTCCCCTATACATGTTTTTGCCTTGTATCTTATTGAACTCACTGGACGTGCTGCTGCACTTGTTGCTGCGCACATGGAGAAGCCTAGTGGCCAACCTGGAGTACAAAATCTGACAAGATCACAGGTAGAGTTAGAAAACATTGCCAGCACCTTCGATGCATTGGGAGAGGTATATGATGCTGTCAGAATTGAGACCTTAAATATTGTGTCAGCCTATTCAACCATTCACGAGGACATATACAACTCGGCTAGTGAGAAATTCACAAGCTTGGTCCTCCTTCCATTCCACAAACAATTAACCTCAGAAGGCACACTTGAAATGACCAATGCTGCTTACAAAGAAATAAACCAAAATGTAATGCAATTTGCACCTTGTTCTGTTGGAATCTTTGTTGATCGTGATTTCGGATCAATTCCAAAAAAGGGCCTCAGAATTCTTATGCTCTTTGTTGGAGGCCCTGATGATCGTGAAGCATTAGCTATTGCATGGAGGATGGCAGGACATCCAGGAATTCAACTATCAGTGGTTAGGATTTTTTTGTTGGATGAAGCAGCAGAAGTTGATACTTCAAATCACGGGGAAGCACAAGGGATATTATCTGCTGTTATGGATAATGAGAAGCAGAAAGAGTTGGATGATGAGTATGTGAGTTCATTTAGACTTACCGCAGTGAACAATGAGGACTCTATATCATACTCAGAGATTGATGTCCATAGTGGTGAAGATATTCCCTCGGTCCTCAATGATCTAGAGAAAAACGGTTGTGATTTATACATTGTTGGACAAGGGAATTGTAGGAACTCTCGCGTGTTTTCGAATTTGTTAGAGTGGTGTGATTGCTTAGAACTCGGAGTTATAGGGGATATTTTGGCTTCGAACAATTTTGGTTCGCGCTCGTCTTTGTTGGTTATTCAACAATATGGCTATGGAGGGATGGTATTTGGAAAGGATGCCAACCATTTGGCCAACACTAGCAATGGATTTGAATCACTTATCGTGAAGACAGAATAA 2451 0.4162 MADTLPACYKVYVTNPNRIWQTDNVLKKELPTLAFQIAFTVLLSRLFYLIYKPFRQTRLIAQISVGFLLTRPLLGRSAAVFEFIFPVNGVLNIEVLAHIGLIFYAFLSGLEMNLNNILQVKKKAASIAIAGIIFPMVMAPALYVLLRKFYGKNDVNIHLEESTSSAFLIWSVVLTVTGFPVLAHTLSELKLLYTGLGKAALTAAMIGETYGWILFTLVVPFAINGEKAVYSVLSTTLFIVVCVFVVRPILARIIDRKTEKDEWDDNQLIFVVMGVLACSYITDILGAHGIVGAFVYGLILPHGRFADHLMSILDDFAGGFLAPLFFGGTGMRLMLATIFLEGHWPMTLLVILLLCTLKILSTIFVTFFFGMRTQDGLALGLLLNTKGAMALIMLNIAWDRSIFSVPTYAVVTSAVLLMTVAVSPIINAVYRPRKRFEQNKLKTIQKLRLDAELRILACVHNTRQATGMISIIESLNATRLSPIHVFALYLIELTGRAAALVAAHMEKPSGQPGVQNLTRSQVELENIASTFDALGEVYDAVRIETLNIVSAYSTIHEDIYNSASEKFTSLVLLPFHKQLTSEGTLEMTNAAYKEINQNVMQFAPCSVGIFVDRDFGSIPKKGLRILMLFVGGPDDREALAIAWRMAGHPGIQLSVVRIFLLDEAAEVDTSNHGEAQGILSAVMDNEKQKELDDEYVSSFRLTAVNNEDSISYSEIDVHSGEDIPSVLNDLEKNGCDLYIVGQGNCRNSRVFSNLLEWCDCLELGVIGDILASNNFGSRSSLLVIQQYGYGGMVFGKDANHLANTSNGFESLIVKTE 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02900 816 PANTHER CATION/H + ANTIPORTER 5 801 - -
Cca03g02900 816 Pfam Sodium/hydrogen exchanger family 38 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca03g02900 816 PANTHER CATION/H+ EXCHANGER 3 5 801 - -
Cca03g02900 816 Gene3D - 32 440 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02900 Cca-Chr3 50348621 50351541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02900 8 787 Antiporter Super Family AT2G13620 38.657 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02900 - - gmx:100800072 1313.13