Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02892 ATGGCATCGAAAAGGACATTTGATGAGGATGATCATCAGGGCGATGATGGCAGAGATCTTCATAATCATGCTAAGAGGAGACATGGCGACCCGCAACAAGACGACGCCACGAATTTCTATCTTGTCGCTATTGAAACTGTCGTTCGAAGAGTGGTGCCGGAGATAATTCAAACTACGCTCCAACGTTACCTAGGACACGAAGGGTCTATCCGGCCAAGCCTTAATCTGGGTGTCACATCTAGATCCAAAGGTTTAGAATTGTGCTTTGTGAAAAGGCTGCCTTCAGAAATTTTCACCCTGGCCAAACTCACAGCCGAGGATGGTGGTCCACTTCAAATCGAGCTGCGTTATGCTGCATCGCAGCAACGCGTAGTCACGGGAGAAGGTTCCACCATGAAGGTTCAGATCTGTGTCCTAGCTGGTGATTTTGGAGACGAGGACTGGACTACACAGAAATTTAATGCCCAAATTCTGAAACCAAGAGACAAGGGGCCATTACTGAAAGGAAATACGGTTCTTAAACTTAAAAATGGGGTTGGTGATATCGATAAGAATCTAGTGTTTGGCGATAACTCTTGCTGGACAAAGAACAAAAAGTTTCGGTTAGGAGTTATAATTTTGGAATCTAGTTCCGCTGGAGCAGACACAAGGGAAGGAAAAAGTGAGCCCTTCAGGGTCAAGGACAACCGTGGAGTGTCGTACAAGAAACACGAGCGTCCGTCATTGGATGATGAGGTGTGGCGTTTGAAGAATATAGCAAAAGAGGGTAAGATTCACAGGCAGCTTTCCGAGAATGGAATAAAAAATGTTAAGGATCTTTTGCGGCGGAACACAACCGGTTCATTACAGGAGAAATTCAGCGACGTTAGATTATGGCACAAAATGCTTGCGCATGCTAAAGATTGTAAAGTAGACGATGGTGAGTTGTACACCTATCGGTATCACCCAACGGAACAAGCATTACCCGTTTCCCTTGTCTTCAACTGTATCTATGAGGTTGTGTGGGTGGCTTTTAATGATGGGCAACTCTGTCCTGTGCAATCTTTGAATTTGGTGCAGAAGAGTTGGGTGGACAGAGCTAAGGACGAAGCATACAAAAATTTGAAGGATCTGGTGAAAATTGAGGCACCCACACATGGCACACTGACACCTTACGGTGCTCCAGATCAAGATCTTCGACAACTCTTCCTAACGCAAGGCCAATTAGACACGTGGCCTTCGACCTCAGCATCAACTATTTTTGGGCCAATGCAAGGAGAAGTACCACTAAACTTCTTTACAGTGGGGCAGGTTGTCCCAGAAGAAGCAAATATTGATGGTGGAAACGGATGGGAAAATTATGACTTAGAAAATTACATTATTTCTAACCAATCGGAGCAATTGAATCCTAATTCCTTTCCCTATGGTGATGATGGAGCAGAATCTAGCAAGCATTCCTCTTTTCCCAACACTAAGTTAAGCAAAGGGAAAAGCAAAACAGTTTGGCAGAAGACTCGAAATACAGATCCCTCTCTCAGAAGAACCTTCCGCCATCAAACCAATAGCGTCTTCCCAGCAAAAAGACAATATAAGCAAGAGGGTGATGGAAGGGATGTTCAAGCTCTTGTTCACGACTCAAAGCGGAGACGTGAAGATTCACAACAATCGGACACTGTCTGTACCAGTAAAAGTAGGAGATCGCTATTTCACTTGGAGCAGCATGACATCGCGCGGTACTTTGAAAATTTTTCTCGAAGAGTGGTACGAGAGGAGTTGGAACACAAACTATCGTTAAGTTGCAGACCAACTGTTAATCATATTGGAACATCTGGAACCGAATTCTTGCAACTGGTTTTTGAGAATGAATTGCCAGATACAATTTTTACTTTCTCCAAGATCAAAGCTAAAGATAACATTTATGTTAAGATTGCTCTTTATGACACTATATCTCAGTCTATAGTCGCTGATGGTCCACTGTCTTCGATCAAGATAGATATTTGCGTCCTTGACAGTACTAAATATAAAATCTTACGTCAAAGAGAACATAAAGGTAAGTTACTGAAAGGAGAAACTGTTATTACACTTAAAAATGGAGTTGGTTATATCAACAACGTTGTGTTCACTGATAACACATGCTGGACAAGCAACCGACGCGTCGTGTTAGGAGCCAAGGTTGTGCAATCAAATTTGAATGACGCGATAAACATCAGAAGTGGTAGAAGTAAACCTTTTGTTGTTAAGGATAATAGAGGAGAGTTGAATCAGAAACACTACCCTCCATCCCTCAAAGATGAAATATGGCGTTTGAAATATATATCAAAAACTGGGAAAATTTATGAGCGGTTGTCTTCAGCCGGGATAAACACCGTTGAGGATCTGTTGCAAGAGCTTGAAACCAATCCAACATCTTTACAAGAGAAATTTGGCAAAATTTCAAAAAAGCGATGGGAAGAAGTTATTGAGCATGCTAAAACTTGTGTTATTGCTGAAGTGACAACTGATGGACAAAGTTACCATTCAGCTGAGAAGAATCTCAACTCCGCCGAGAGGGATCTGGTGCCAGTTAAGGCAATAGGACATGATTCAGTGAAAACAGTCACACAAGCTACACAATACGGTGCTCTACATAAAGATCTGCAGCATCATGCTGCATTCCAAATTGCTCAGCAAGAAGAAATTTCTAGACAAATGGATAACTGGTCAACAGTGGGGTTTGTCCCTCAAGCAACAATTGCTGATGGAACCACAAGTTGTTGGACTCAACCTTACATATAA 2754 0.4248 MASKRTFDEDDHQGDDGRDLHNHAKRRHGDPQQDDATNFYLVAIETVVRRVVPEIIQTTLQRYLGHEGSIRPSLNLGVTSRSKGLELCFVKRLPSEIFTLAKLTAEDGGPLQIELRYAASQQRVVTGEGSTMKVQICVLAGDFGDEDWTTQKFNAQILKPRDKGPLLKGNTVLKLKNGVGDIDKNLVFGDNSCWTKNKKFRLGVIILESSSAGADTREGKSEPFRVKDNRGVSYKKHERPSLDDEVWRLKNIAKEGKIHRQLSENGIKNVKDLLRRNTTGSLQEKFSDVRLWHKMLAHAKDCKVDDGELYTYRYHPTEQALPVSLVFNCIYEVVWVAFNDGQLCPVQSLNLVQKSWVDRAKDEAYKNLKDLVKIEAPTHGTLTPYGAPDQDLRQLFLTQGQLDTWPSTSASTIFGPMQGEVPLNFFTVGQVVPEEANIDGGNGWENYDLENYIISNQSEQLNPNSFPYGDDGAESSKHSSFPNTKLSKGKSKTVWQKTRNTDPSLRRTFRHQTNSVFPAKRQYKQEGDGRDVQALVHDSKRRREDSQQSDTVCTSKSRRSLFHLEQHDIARYFENFSRRVVREELEHKLSLSCRPTVNHIGTSGTEFLQLVFENELPDTIFTFSKIKAKDNIYVKIALYDTISQSIVADGPLSSIKIDICVLDSTKYKILRQREHKGKLLKGETVITLKNGVGYINNVVFTDNTCWTSNRRVVLGAKVVQSNLNDAINIRSGRSKPFVVKDNRGELNQKHYPPSLKDEIWRLKYISKTGKIYERLSSAGINTVEDLLQELETNPTSLQEKFGKISKKRWEEVIEHAKTCVIAEVTTDGQSYHSAEKNLNSAERDLVPVKAIGHDSVKTVTQATQYGALHKDLQHHAAFQIAQQEEISRQMDNWSTVGFVPQATIADGTTSCWTQPYI 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02892 917 MobiDBLite consensus disorder prediction 476 520 - -
Cca03g02892 917 Pfam Calmodulin binding protein central domain 241 302 IPR046830 -
Cca03g02892 917 Pfam Calmodulin binding protein central domain 754 819 IPR046830 -
Cca03g02892 917 MobiDBLite consensus disorder prediction 1 32 - -
Cca03g02892 917 PANTHER CALMODULIN-BINDING PROTEIN 34 378 - -
Cca03g02892 917 PANTHER OS02G0177800 PROTEIN 34 378 IPR012416 GO:0005516
Cca03g02892 917 MobiDBLite consensus disorder prediction 460 531 - -
Cca03g02892 917 Pfam Calmodulin binding protein C-terminal domain 312 373 IPR046829 -
Cca03g02892 917 Pfam Calmodulin binding protein-like N-terminal domain 608 742 IPR046831 -
Cca03g02892 917 Pfam Calmodulin binding protein-like N-terminal domain 85 229 IPR046831 -
Cca03g02892 917 PANTHER OS02G0177800 PROTEIN 540 822 IPR012416 GO:0005516
Cca03g02892 917 PANTHER CALMODULIN-BINDING PROTEIN 540 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02892 Cca-Chr3 50221921 50231632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02892 573 823 Calmodulin-binding Proteins AT5G26920 35.926 1.76e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02892 - - ccaj:109796441 799.66