Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02891 ATGGTATCAAAAAAGCAATCTCCTCAGAAGCACCAAGGCAGTGGTAAAGTTCCAATTCAGAAGGAAAATTGGAGCCATGGGGATACAAAACATGCTTCAATCAGTTGCCCTAGAAATGCAGTTAACGCACTATGGATGAGTGACCACGCTTCCTATTGGGAAAATTTTCTGCGAAAAGTGGTAAGAGAGGTGGTAGAACAAAAAATCCTGGGCAAGGCTCATCTATTTCAAAGAAAAAGGGTTAATGAGGCTGGCATATCTGGGGTCAAACCCTTAAAGTTGTGTTTTATTAATAAGTTGCCTGATACAATTTTTACTCGGTCTAACATAATAGCAGAAGACGAAACACCCCTTCAAATTGCTCTAATTGATGTTGGATCTGAGTCTGTAGTTAGTGATGGTCCTCTTTCCTCACTAAAGATAGAAATCTATGTCTTGGATGGTGATTTCGGATCTTGTGGCAGTGAGGATTGGAATGAAGATGAGTTCAATTCCAATATCTTACGTGAAAGAGATGGTAAAGAGCCACTATTGATTGGAGAGAGGATTATTACTCTAAAAAATGGAGTTGGTTGTATTACTAAACTTGCCTTCTCTGACAACTCGAGATGGCAAAGAAGCAGAAGGTTCAGGATTGGAGTCAGAGTTTTGCAACCAATTTCCAATGGAGAAAAGATTCAGGAAGGTAGAAGTGAACCTTTTGTGGTCAAAGATAACAGAGGAGAGCCCTACAAGAAGCACTACCCTCCATACTTGAATGATGATATATGGCGTTTGAAGAACATTGCTAAGGAAAGAAAATTTCACAATCAGCTCTCTTTACATGGAATTCACAAAGTGAAGGATCTCTTGCGGTTGTACATAACCAACGAACCTTCACTATATGAAATGTTCGGAAACATTTCAAGGAAATCATGGTTAGCAATCACTGAACATGCCAAAACCTGTGTGATAGATGATTACAAGCTCTACAGTTATCACTCGGAAGAACTGCAAATCGGCCTGCTATTCAATTCCATCTACATCCTCGTGGGAGTGACTTTTGATTGGCAAAATTACTATTCACCAGATACTCTCCCCCCCAAAGAAAAGCATTTGGTGGAAATTGTGAAGCAGCGTGCTTACAGAAATGTTAACAATTTGAAATTGATTGATGACACTAAGTTGAACTGTTTAAATCTAGCGGCATGTCTAAAAGCAAGGCAGTCTGACACTCCAGATCAAGGTCTGCAACATATTAATATCTCAACTGCACAAGTAACATTGCCAGGTTACAGTCAACCATTTATCTCTGCTTCATATGCTGATGAAGGTATAATGCATGATCACCAAGTTTATGCTGATCTACAGCCAGACATAGGAGAAATGTCACAAAACCGTTATGATTTGGATGAATTTTCCGCAGGAATGTACACTGAAGGGGATAGTTTGCACCTTAATGGATCGTATTTTCCATTTGTGCAGGGTGGTTATTCATCTGAGAATGAAAGATCAGTGATTCAATTCATAAATGATTGTCCTCCTTATACAACATTGGTACCAGAAACTAGCTTTTTCATTGGTTCCTCTGTTGGAGCAGAATTTAACAACTATTCCACTTTCATCGATTCTGCTGCGGATATATCGGGCACTGGGAAACCTAAAGCAGTGTGGTATAAGATTCTTGTTGCTCTCAAATGGGTCATATCAATAAAAAGGGAAACAGCTGCAAGAAAGAATGTCAAGCAGTTTCACTATAACTATTAG 1746 0.3923 MVSKKQSPQKHQGSGKVPIQKENWSHGDTKHASISCPRNAVNALWMSDHASYWENFLRKVVREVVEQKILGKAHLFQRKRVNEAGISGVKPLKLCFINKLPDTIFTRSNIIAEDETPLQIALIDVGSESVVSDGPLSSLKIEIYVLDGDFGSCGSEDWNEDEFNSNILRERDGKEPLLIGERIITLKNGVGCITKLAFSDNSRWQRSRRFRIGVRVLQPISNGEKIQEGRSEPFVVKDNRGEPYKKHYPPYLNDDIWRLKNIAKERKFHNQLSLHGIHKVKDLLRLYITNEPSLYEMFGNISRKSWLAITEHAKTCVIDDYKLYSYHSEELQIGLLFNSIYILVGVTFDWQNYYSPDTLPPKEKHLVEIVKQRAYRNVNNLKLIDDTKLNCLNLAACLKARQSDTPDQGLQHINISTAQVTLPGYSQPFISASYADEGIMHDHQVYADLQPDIGEMSQNRYDLDEFSAGMYTEGDSLHLNGSYFPFVQGGYSSENERSVIQFINDCPPYTTLVPETSFFIGSSVGAEFNNYSTFIDSAADISGTGKPKAVWYKILVALKWVISIKRETAARKNVKQFHYNY 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02891 581 MobiDBLite consensus disorder prediction 1 19 - -
Cca03g02891 581 Pfam Calmodulin binding protein central domain 252 316 IPR046830 -
Cca03g02891 581 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
Cca03g02891 581 PANTHER OS02G0177800 PROTEIN 1 574 IPR012416 GO:0005516
Cca03g02891 581 PANTHER CALMODULIN-BINDING PROTEIN 1 574 - -
Cca03g02891 581 MobiDBLite consensus disorder prediction 1 23 - -
Cca03g02891 581 Pfam Calmodulin binding protein C-terminal domain 322 382 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02891 Cca-Chr3 50212718 50216511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02891 51 580 Calmodulin-binding Proteins AT4G25800 32.343 3.57e-81 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02891 - - gmx:100816427 876.315